Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:96315951-96336250

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mir10a	11	96317165 to 96317274	109	+	miRNA gene	microRNA 10a
Cpgi3646	11	96317901 to 96318182	281		CpG island	CpG island 3646
Del(11Hoxb3-Hoxb4)1Karl	11	96318267 to 96347930	29663		cytogenetic marker	deletion, Chr 11, Stefan Karlsson 1
Hoxb4	11	96318267 to 96321638	3371	+	protein coding gene	homeobox B4
Cpgi3647	11	96318592 to 96319551	959		CpG island	CpG island 3647
Tssr104509	11	96318650 to 96318718	68	+	TSS region	transcription start site region 104509
Tssr104510	11	96318731 to 96318745	14	+	TSS region	transcription start site region 104510
Tssr104511	11	96318755 to 96318775	20	+	TSS region	transcription start site region 104511
Tssr104512	11	96318828 to 96318845	17	+	TSS region	transcription start site region 104512
Tssr104513	11	96318861 to 96318872	11	+	TSS region	transcription start site region 104513
Cpgi3648	11	96319953 to 96320391	438		CpG island	CpG island 3648
Cpgi3649	11	96320676 to 96320975	299		CpG island	CpG island 3649
Tssr104514	11	96323253 to 96323255	2	+	TSS region	transcription start site region 104514
Hoxb3	11	96323326 to 96347930	24604	+	protein coding gene	homeobox B3
Cpgi3650	11	96325951 to 96326250	299		CpG island	CpG island 3650
Tssr104515	11	96332433 to 96332457	24	+	TSS region	transcription start site region 104515
Tssr104516	11	96332541 to 96332546	5	+	TSS region	transcription start site region 104516
Cpgi3651	11	96332624 to 96333525	901		CpG island	CpG island 3651
Tssr104517	11	96332817 to 96332840	23	+	TSS region	transcription start site region 104517