Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:96303873-96313891

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Hoxb5os	11	96291037 to 96306910	15873	-	antisense lncRNA gene	homeobox B5 and homeobox B6, opposite strand
Cpgi3643	11	96303085 to 96304244	1159		CpG island	CpG island 3643
Hoxb5	11	96303512 to 96306121	2609	+	protein coding gene	homeobox B5
Tssr104496	11	96303897 to 96303916	19	+	TSS region	transcription start site region 104496
Tssr104497	11	96304024 to 96304041	17	+	TSS region	transcription start site region 104497
Tssr104498	11	96304055 to 96304074	19	+	TSS region	transcription start site region 104498
Tssr104499	11	96304080 to 96304092	12	+	TSS region	transcription start site region 104499
Tssr104500	11	96304122 to 96304139	17	+	TSS region	transcription start site region 104500
Cpgi3644	11	96304843 to 96305246	403		CpG island	CpG island 3644
Tssr104501	11	96306539 to 96306543	4	+	TSS region	transcription start site region 104501
Tssr110327	11	96306901 to 96306915	14	-	TSS region	transcription start site region 110327
Tssr104502	11	96307052 to 96307055	3	+	TSS region	transcription start site region 104502
Tssr104503	11	96307069 to 96307096	27	+	TSS region	transcription start site region 104503
Tssr104504	11	96307117 to 96307128	11	+	TSS region	transcription start site region 104504
Tssr104505	11	96307131 to 96307155	24	+	TSS region	transcription start site region 104505
Tssr110328	11	96308873 to 96308891	18	-	TSS region	transcription start site region 110328