Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:96298512-96311121

36 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Hoxb5os	11	96291037 to 96306910	15873	-	antisense lncRNA gene	homeobox B5 and homeobox B6, opposite strand
Hoxb6	11	96292710 to 96301569	8859	+	protein coding gene	homeobox B6
Tssr104480	11	96298754 to 96298770	16	+	TSS region	transcription start site region 104480
Tssr104481	11	96298784 to 96298798	14	+	TSS region	transcription start site region 104481
Tssr104482	11	96298805 to 96298821	16	+	TSS region	transcription start site region 104482
Cpgi3641	11	96298925 to 96300141	1216		CpG island	CpG island 3641
Tssr104483	11	96299046 to 96299083	37	+	TSS region	transcription start site region 104483
Tssr104484	11	96299089 to 96299102	13	+	TSS region	transcription start site region 104484
Tssr104485	11	96299112 to 96299129	17	+	TSS region	transcription start site region 104485
Tssr104486	11	96299137 to 96299148	11	+	TSS region	transcription start site region 104486
Tssr104487	11	96299207 to 96299222	15	+	TSS region	transcription start site region 104487
Tssr104488	11	96299223 to 96299252	29	+	TSS region	transcription start site region 104488
Tssr3658	11	96299253 to 96299265	12	+	TSS region	transcription start site region 3658
Cpgi3642	11	96300547 to 96301134	587		CpG island	CpG island 3642
Cpgi3643	11	96303085 to 96304244	1159		CpG island	CpG island 3643
Tssr104489	11	96303507 to 96303551	44	+	TSS region	transcription start site region 104489
Hoxb5	11	96303512 to 96306121	2609	+	protein coding gene	homeobox B5
Tssr104490	11	96303554 to 96303561	7	+	TSS region	transcription start site region 104490
Tssr104491	11	96303573 to 96303580	7	+	TSS region	transcription start site region 104491
Tssr104492	11	96303591 to 96303605	14	+	TSS region	transcription start site region 104492
Tssr104493	11	96303614 to 96303633	19	+	TSS region	transcription start site region 104493
Tssr104494	11	96303650 to 96303718	68	+	TSS region	transcription start site region 104494
Tssr104495	11	96303725 to 96303759	34	+	TSS region	transcription start site region 104495
Tssr104496	11	96303897 to 96303916	19	+	TSS region	transcription start site region 104496
Tssr104497	11	96304024 to 96304041	17	+	TSS region	transcription start site region 104497
Tssr104498	11	96304055 to 96304074	19	+	TSS region	transcription start site region 104498
Tssr104499	11	96304080 to 96304092	12	+	TSS region	transcription start site region 104499
Tssr104500	11	96304122 to 96304139	17	+	TSS region	transcription start site region 104500
Cpgi3644	11	96304843 to 96305246	403		CpG island	CpG island 3644
Tssr104501	11	96306539 to 96306543	4	+	TSS region	transcription start site region 104501
Tssr110327	11	96306901 to 96306915	14	-	TSS region	transcription start site region 110327
Tssr104502	11	96307052 to 96307055	3	+	TSS region	transcription start site region 104502
Tssr104503	11	96307069 to 96307096	27	+	TSS region	transcription start site region 104503
Tssr104504	11	96307117 to 96307128	11	+	TSS region	transcription start site region 104504
Tssr104505	11	96307131 to 96307155	24	+	TSS region	transcription start site region 104505
Tssr110328	11	96308873 to 96308891	18	-	TSS region	transcription start site region 110328