Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:96254317-96274326

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm53	11	96251660 to 96264484	12824	+	lincRNA gene	predicted gene 53
Cpgi3627	11	96255293 to 96255957	664		CpG island	CpG island 3627
Cpgi3628	11	96260274 to 96260621	347		CpG island	CpG island 3628
Cpgi3629	11	96261471 to 96261911	440		CpG island	CpG island 3629
Tssr104447	11	96263891 to 96263911	20	+	TSS region	transcription start site region 104447
Tssr104448	11	96264268 to 96264284	16	+	TSS region	transcription start site region 104448
Tssr3657	11	96264317 to 96264326	9	+	TSS region	transcription start site region 3657
Mir196a-1	11	96265164 to 96265265	101	+	miRNA gene	microRNA 196a-1
Cpgi3630	11	96270114 to 96270312	198		CpG island	CpG island 3630
Cpgi3631	11	96270845 to 96273082	2237		CpG island	CpG island 3631
Tssr104449	11	96271142 to 96271153	11	+	TSS region	transcription start site region 104449
Tssr104450	11	96271209 to 96271224	15	+	TSS region	transcription start site region 104450
Tssr104451	11	96271230 to 96271239	9	+	TSS region	transcription start site region 104451
Tssr104452	11	96271323 to 96271338	15	+	TSS region	transcription start site region 104452
Tssr104453	11	96271453 to 96271482	29	+	TSS region	transcription start site region 104453
Hoxb9	11	96271457 to 96276595	5138	+	protein coding gene	homeobox B9
Tssr104454	11	96271616 to 96271657	41	+	TSS region	transcription start site region 104454
Tssr104455	11	96271917 to 96271933	16	+	TSS region	transcription start site region 104455
Tssr104456	11	96271935 to 96271961	26	+	TSS region	transcription start site region 104456