MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:96236227-96266234

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr104438	11	96248594 to 96248602	8	+	TSS region	transcription start site region 104438
Gm11539	11	96248633 to 96249189	556	+	pseudogene	predicted gene 11539
Tssr104439	11	96251100 to 96251111	11	+	TSS region	transcription start site region 104439
Tssr104440	11	96251172 to 96251226	54	+	TSS region	transcription start site region 104440
Tssr104441	11	96251227 to 96251234	7	+	TSS region	transcription start site region 104441
Tssr104442	11	96251239 to 96251253	14	+	TSS region	transcription start site region 104442
Tssr104443	11	96251273 to 96251282	9	+	TSS region	transcription start site region 104443
Cpgi3626	11	96251465 to 96252137	672		CpG island	CpG island 3626
Tssr104444	11	96251638 to 96251668	30	+	TSS region	transcription start site region 104444
Gm53	11	96251660 to 96264484	12824	+	lincRNA gene	predicted gene 53
Tssr104445	11	96251674 to 96251696	22	+	TSS region	transcription start site region 104445
Tssr104446	11	96251759 to 96251774	15	+	TSS region	transcription start site region 104446
Cpgi3627	11	96255293 to 96255957	664		CpG island	CpG island 3627
Cpgi3628	11	96260274 to 96260621	347		CpG island	CpG island 3628
Cpgi3629	11	96261471 to 96261911	440		CpG island	CpG island 3629
Tssr104447	11	96263891 to 96263911	20	+	TSS region	transcription start site region 104447
Tssr104448	11	96264268 to 96264284	16	+	TSS region	transcription start site region 104448
Tssr3657	11	96264317 to 96264326	9	+	TSS region	transcription start site region 3657
Mir196a-1	11	96265164 to 96265265	101	+	miRNA gene	microRNA 196a-1