Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:96223594-96273602

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr104438 11 96248594 to 96248602 8 + TSS region transcription start site region 104438
Gm11539 11 96248633 to 96249189 556 + pseudogene predicted gene 11539
Tssr104439 11 96251100 to 96251111 11 + TSS region transcription start site region 104439
Tssr104440 11 96251172 to 96251226 54 + TSS region transcription start site region 104440
Tssr104441 11 96251227 to 96251234 7 + TSS region transcription start site region 104441
Tssr104442 11 96251239 to 96251253 14 + TSS region transcription start site region 104442
Tssr104443 11 96251273 to 96251282 9 + TSS region transcription start site region 104443
Cpgi3626 11 96251465 to 96252137 672 CpG island CpG island 3626
Tssr104444 11 96251638 to 96251668 30 + TSS region transcription start site region 104444
Gm53 11 96251660 to 96264484 12824 + lincRNA gene predicted gene 53
Tssr104445 11 96251674 to 96251696 22 + TSS region transcription start site region 104445
Tssr104446 11 96251759 to 96251774 15 + TSS region transcription start site region 104446
Cpgi3627 11 96255293 to 96255957 664 CpG island CpG island 3627
Cpgi3628 11 96260274 to 96260621 347 CpG island CpG island 3628
Cpgi3629 11 96261471 to 96261911 440 CpG island CpG island 3629
Tssr104447 11 96263891 to 96263911 20 + TSS region transcription start site region 104447
Tssr104448 11 96264268 to 96264284 16 + TSS region transcription start site region 104448
Tssr3657 11 96264317 to 96264326 9 + TSS region transcription start site region 3657
Mir196a-1 11 96265164 to 96265265 101 + miRNA gene microRNA 196a-1
Cpgi3630 11 96270114 to 96270312 198 CpG island CpG island 3630
Cpgi3631 11 96270845 to 96273082 2237 CpG island CpG island 3631
Tssr104449 11 96271142 to 96271153 11 + TSS region transcription start site region 104449
Tssr104450 11 96271209 to 96271224 15 + TSS region transcription start site region 104450
Tssr104451 11 96271230 to 96271239 9 + TSS region transcription start site region 104451
Tssr104452 11 96271323 to 96271338 15 + TSS region transcription start site region 104452
Tssr104453 11 96271453 to 96271482 29 + TSS region transcription start site region 104453
Hoxb9 11 96271457 to 96276595 5138 + protein coding gene homeobox B9
Tssr104454 11 96271616 to 96271657 41 + TSS region transcription start site region 104454
Tssr104455 11 96271917 to 96271933 16 + TSS region transcription start site region 104455
Tssr104456 11 96271935 to 96271961 26 + TSS region transcription start site region 104456