Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:95972793-96175694

67 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dfs2	11	21857364 to 95990405	74133041		QTL	dental fluorosis suseptibility 2
Igf2bp1	11	95957163 to 96005940	48777	-	protein coding gene	insulin-like growth factor 2 mRNA binding protein 1
Tssr104419	11	95973153 to 95973155	2	+	TSS region	transcription start site region 104419
Tssr110301	11	95982562 to 95982573	11	-	TSS region	transcription start site region 110301
Tssr110302	11	95982583 to 95982593	10	-	TSS region	transcription start site region 110302
Tssr110303	11	95982602 to 95982627	25	-	TSS region	transcription start site region 110303
Tssr110304	11	95982630 to 95982646	16	-	TSS region	transcription start site region 110304
Cpgi3608	11	95990947 to 95991188	241		CpG island	CpG island 3608
Cpgi3609	11	95991248 to 95991617	369		CpG island	CpG island 3609
2610524E12Rik	11	95997233 to 95997965	732		unclassified gene	RIKEN cDNA 2610524E12 gene
Tssr110305	11	96001403 to 96001409	6	-	TSS region	transcription start site region 110305
Cpgi3610	11	96004420 to 96006253	1833		CpG island	CpG island 3610
Tssr110306	11	96005872 to 96005952	80	-	TSS region	transcription start site region 110306
Gm29202	11	96005889 to 96008055	2166	+	antisense lncRNA gene	predicted gene 29202
Tssr110307	11	96005961 to 96005972	11	-	TSS region	transcription start site region 110307
Tssr110308	11	96005975 to 96005985	10	-	TSS region	transcription start site region 110308
Tssr110309	11	96006157 to 96006173	16	-	TSS region	transcription start site region 110309
Gm37179	11	96006333 to 96007155	822	-	unclassified gene	predicted gene, 37179
Cpgi3611	11	96006370 to 96007974	1604		CpG island	CpG island 3611
Tssr110310	11	96006983 to 96007019	36	-	TSS region	transcription start site region 110310
Tssr104420	11	96007322 to 96007343	21	+	TSS region	transcription start site region 104420
Tssr104421	11	96024540 to 96024558	18	+	TSS region	transcription start site region 104421
Gip	11	96024545 to 96030831	6286	+	protein coding gene	gastric inhibitory polypeptide
Gm24949	11	96032678 to 96032892	214	+	snoRNA gene	predicted gene, 24949
Cpgi3612	11	96034618 to 96035374	756		CpG island	CpG island 3612
Snf8	11	96034890 to 96047430	12540	+	protein coding gene	SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)
Tssr104422	11	96034906 to 96034952	46	+	TSS region	transcription start site region 104422
Ube2z	11	96047431 to 96065364	17933	-	protein coding gene	ubiquitin-conjugating enzyme E2Z
Tssr110311	11	96050219 to 96050253	34	-	TSS region	transcription start site region 110311
D11Moh21	11	96056130 to 96056320	190		DNA segment	DNA segment, Chr 11, KL Mohlke 21
Cpgi3613	11	96064441 to 96066027	1586		CpG island	CpG island 3613
Tssr110312	11	96064997 to 96065029	32	-	TSS region	transcription start site region 110312
Tssr110313	11	96065272 to 96065307	35	-	TSS region	transcription start site region 110313
Tssr110314	11	96065315 to 96065327	12	-	TSS region	transcription start site region 110314
Tssr110315	11	96065333 to 96065344	11	-	TSS region	transcription start site region 110315
Tssr110316	11	96065350 to 96065369	19	-	TSS region	transcription start site region 110316
Atp5g1	11	96072793 to 96075694	2901	-	protein coding gene	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9)
Tssr110317	11	96073023 to 96073039	16	-	TSS region	transcription start site region 110317
Cpgi3614	11	96075211 to 96076243	1032		CpG island	CpG island 3614
Tssr110318	11	96075367 to 96075402	35	-	TSS region	transcription start site region 110318
Tssr110319	11	96075596 to 96075636	40	-	TSS region	transcription start site region 110319
Tssr110320	11	96075655 to 96075677	22	-	TSS region	transcription start site region 110320
Tssr104423	11	96076098 to 96076130	32	+	TSS region	transcription start site region 104423
Tssr104424	11	96081069 to 96081090	21	+	TSS region	transcription start site region 104424
Tssr104425	11	96081178 to 96081216	38	+	TSS region	transcription start site region 104425
Gm22423	11	96083673 to 96083856	183	-	snRNA gene	predicted gene, 22423
Cpgi3615	11	96086524 to 96086745	221		CpG island	CpG island 3615
Tssr104426	11	96096967 to 96096971	4	+	TSS region	transcription start site region 104426
Calcoco2	11	96099326 to 96111964	12638	-	protein coding gene	calcium binding and coiled-coil domain 2
D11Moh23	11	96105838 to 96106290	452		DNA segment	DNA segment, Chr 11, KL Mohlke 23
Tssr110321	11	96111958 to 96111992	34	-	TSS region	transcription start site region 110321
Tssr104427	11	96124082 to 96124111	29	+	TSS region	transcription start site region 104427
Cpgi3616	11	96124188 to 96124807	619		CpG island	CpG island 3616
Tssr3656	11	96124433 to 96124444	11	+	TSS region	transcription start site region 3656
Tssr110322	11	96124458 to 96124478	20	-	TSS region	transcription start site region 110322
Tssr104428	11	96124485 to 96124506	21	+	TSS region	transcription start site region 104428
Tssr104429	11	96124513 to 96124541	28	+	TSS region	transcription start site region 104429
Tssr104430	11	96124755 to 96124781	26	+	TSS region	transcription start site region 104430
Ttll6	11	96133786 to 96165451	31665	+	protein coding gene	tubulin tyrosine ligase-like family, member 6
Gm30084	11	96136357 to 96141216	4859	-	lncRNA gene	predicted gene, 30084
D11Moh24	11	96147064 to 96147325	261		DNA segment	DNA segment, Chr 11, KL Mohlke 24
Tssr110323	11	96147641 to 96147646	5	-	TSS region	transcription start site region 110323
Cpgi3617	11	96153143 to 96153387	244		CpG island	CpG island 3617
D11Moh26	11	96169127 to 96169329	202		DNA segment	DNA segment, Chr 11, KL Mohlke 26
Cpgi3618	11	96170776 to 96171048	272		CpG island	CpG island 3618
Cpgi3619	11	96173113 to 96173414	301		CpG island	CpG island 3619
Cpgi3620	11	96175445 to 96175724	279		CpG island	CpG island 3620