Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:95853891-95983901

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm38959 11 95854987 to 95858327 3340 - lncRNA gene predicted gene, 38959
Gm11527 11 95858162 to 95859174 1012 - lincRNA gene predicted gene 11527
Cpgi3605 11 95858519 to 95859911 1392 CpG island CpG island 3605
Tssr104415 11 95858854 to 95858880 26 + TSS region transcription start site region 104415
4833417C18Rik 11 95858865 to 95861044 2179 + lncRNA gene RIKEN cDNA 4833417C18 gene
Tssr104416 11 95858881 to 95858901 20 + TSS region transcription start site region 104416
Tssr104417 11 95858905 to 95858932 27 + TSS region transcription start site region 104417
n-TQttg6 11 95859172 to 95859243 71 - tRNA gene nuclear encoded tRNA glutamine 6 (anticodon TTG)
Tssr110293 11 95864640 to 95864648 8 - TSS region transcription start site region 110293
B4galnt2 11 95865943 to 95914891 48948 - protein coding gene beta-1,4-N-acetyl-galactosaminyl transferase 2
Cpgi3606 11 95866564 to 95866975 411 CpG island CpG island 3606
Gm11534 11 95869154 to 95876380 7226 + antisense lncRNA gene predicted gene 11534
Tssr110294 11 95912606 to 95912609 3 - TSS region transcription start site region 110294
Cpgi3607 11 95914402 to 95915779 1377 CpG island CpG island 3607
Tssr110295 11 95914854 to 95914881 27 - TSS region transcription start site region 110295
Tssr110296 11 95914884 to 95914901 17 - TSS region transcription start site region 110296
Tssr104418 11 95918891 to 95918901 10 + TSS region transcription start site region 104418
Gm24725 11 95921102 to 95921226 124 + snRNA gene predicted gene, 24725
Tssr3655 11 95922505 to 95922521 16 + TSS region transcription start site region 3655
Igf2bp1 11 95957163 to 96005940 48777 - protein coding gene insulin-like growth factor 2 mRNA binding protein 1
Tssr110297 11 95960290 to 95960292 2 - TSS region transcription start site region 110297
Tssr110298 11 95961679 to 95961683 4 - TSS region transcription start site region 110298
Mir3063 11 95963292 to 95963383 91 - miRNA gene microRNA 3063
Tssr110299 11 95966452 to 95966457 5 - TSS region transcription start site region 110299
Tssr110300 11 95969963 to 95969987 24 - TSS region transcription start site region 110300
Tssr104419 11 95973153 to 95973155 2 + TSS region transcription start site region 104419
Tssr110301 11 95982562 to 95982573 11 - TSS region transcription start site region 110301
Tssr110302 11 95982583 to 95982593 10 - TSS region transcription start site region 110302
Tssr110303 11 95982602 to 95982627 25 - TSS region transcription start site region 110303
Tssr110304 11 95982630 to 95982646 16 - TSS region transcription start site region 110304