Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:95712979-95843017

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3600 11 95712549 to 95713834 1285 CpG island CpG island 3600
Tssr104371 11 95712959 to 95712980 21 + TSS region transcription start site region 104371
Tssr104372 11 95712984 to 95713030 46 + TSS region transcription start site region 104372
Tssr104373 11 95713118 to 95713137 19 + TSS region transcription start site region 104373
Tssr104374 11 95716259 to 95716272 13 + TSS region transcription start site region 104374
Tssr104375 11 95716429 to 95716439 10 + TSS region transcription start site region 104375
B130006D01Rik 11 95723587 to 95726710 3123 + unclassified gene RIKEN cDNA B130006D01 gene
D11Mit263 11 95741636 to 95741780 144 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 263
Tssr104376 11 95748394 to 95748401 7 + TSS region transcription start site region 104376
Tssr104377 11 95748549 to 95748556 7 + TSS region transcription start site region 104377
Tssr104378 11 95748582 to 95748602 20 + TSS region transcription start site region 104378
Tssr104379 11 95748642 to 95748687 45 + TSS region transcription start site region 104379
Zfp652 11 95749067 to 95764715 15648 + protein coding gene zinc finger protein 652
Tssr104380 11 95751360 to 95751364 4 + TSS region transcription start site region 104380
Polr2k-ps 11 95761491 to 95761665 174 + pseudogene polymerase (RNA) II (DNA directed) polypeptide K, pseudogene
Tssr104381 11 95763618 to 95763631 13 + TSS region transcription start site region 104381
Tssr104382 11 95768316 to 95768357 41 + TSS region transcription start site region 104382
Tssr104383 11 95769753 to 95769757 4 + TSS region transcription start site region 104383
Gm38957 11 95776849 to 95789497 12648 + lncRNA gene predicted gene, 38957
D11Moh3 11 95777077 to 95777286 209 DNA segment DNA segment, Chr 11, KL Mohlke 3
Tssr104384 11 95777979 to 95778017 38 + TSS region transcription start site region 104384
Tssr104385 11 95778019 to 95778046 27 + TSS region transcription start site region 104385
Tssr104386 11 95778157 to 95778179 22 + TSS region transcription start site region 104386
D11Moh5 11 95792110 to 95792296 186 DNA segment DNA segment, Chr 11, KL Mohlke 5
Gm29933 11 95795228 to 95808604 13376 - lncRNA gene predicted gene, 29933
Cpgi3601 11 95796415 to 95797207 792 CpG island CpG island 3601
Tssr110280 11 95799814 to 95799816 2 - TSS region transcription start site region 110280
Tssr110281 11 95808596 to 95808619 23 - TSS region transcription start site region 110281
Tssr104387 11 95808752 to 95808765 13 + TSS region transcription start site region 104387
Cpgi3602 11 95823643 to 95825243 1600 CpG island CpG island 3602
Gm38958 11 95823955 to 95824580 625 - protein coding gene predicted gene, 38958
Tssr110282 11 95824405 to 95824416 11 - TSS region transcription start site region 110282
Tssr104388 11 95824469 to 95824512 43 + TSS region transcription start site region 104388
Phospho1 11 95824500 to 95832140 7640 + protein coding gene phosphatase, orphan 1
Tssr104389 11 95824513 to 95824549 36 + TSS region transcription start site region 104389
Tssr104390 11 95824578 to 95824593 15 + TSS region transcription start site region 104390
Tssr104391 11 95825135 to 95825149 14 + TSS region transcription start site region 104391
Tssr104392 11 95825159 to 95825179 20 + TSS region transcription start site region 104392
Tssr104393 11 95825221 to 95825240 19 + TSS region transcription start site region 104393
D11Moh6 11 95825499 to 95825727 228 DNA segment DNA segment, Chr 11, KL Mohlke 6
Abi3 11 95830074 to 95842476 12402 - protein coding gene ABI gene family, member 3
Cpgi3603 11 95830211 to 95831565 1354 CpG island CpG island 3603
Tssr3654 11 95830522 to 95830544 22 + TSS region transcription start site region 3654
Tssr104394 11 95830753 to 95830768 15 + TSS region transcription start site region 104394
Tssr104395 11 95831324 to 95831337 13 + TSS region transcription start site region 104395
Tssr104396 11 95831361 to 95831373 12 + TSS region transcription start site region 104396
Tssr104397 11 95831524 to 95831538 14 + TSS region transcription start site region 104397
Tssr110283 11 95831801 to 95831823 22 - TSS region transcription start site region 110283
Cpgi3604 11 95833671 to 95834623 952 CpG island CpG island 3604
Tssr110284 11 95834116 to 95834131 15 - TSS region transcription start site region 110284
Tssr110285 11 95834135 to 95834149 14 - TSS region transcription start site region 110285
Tssr110286 11 95834168 to 95834180 12 - TSS region transcription start site region 110286
Tssr110287 11 95835345 to 95835352 7 - TSS region transcription start site region 110287
Tssr110288 11 95837203 to 95837219 16 - TSS region transcription start site region 110288
Tssr104398 11 95837264 to 95837285 21 + TSS region transcription start site region 104398
Tssr110289 11 95837577 to 95837584 7 - TSS region transcription start site region 110289
Tssr104399 11 95837793 to 95837795 2 + TSS region transcription start site region 104399
Tssr110290 11 95842151 to 95842168 17 - TSS region transcription start site region 110290
Gngt2 11 95842219 to 95845734 3515 + protein coding gene guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2
Tssr104400 11 95842230 to 95842241 11 + TSS region transcription start site region 104400
Tssr104401 11 95842248 to 95842270 22 + TSS region transcription start site region 104401
Tssr104402 11 95842283 to 95842307 24 + TSS region transcription start site region 104402
Tssr104403 11 95842334 to 95842345 11 + TSS region transcription start site region 104403
Tssr110291 11 95842432 to 95842450 18 - TSS region transcription start site region 110291
Tssr110292 11 95842454 to 95842483 29 - TSS region transcription start site region 110292
Tssr104404 11 95842668 to 95842704 36 + TSS region transcription start site region 104404
Tssr104405 11 95842706 to 95842721 15 + TSS region transcription start site region 104405
Tssr104406 11 95842724 to 95842739 15 + TSS region transcription start site region 104406