Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:95587549-95838834

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ngfr 11 95568818 to 95587698 18880 - protein coding gene nerve growth factor receptor (TNFR superfamily, member 16)
Cpgi3597 11 95585220 to 95588006 2786 CpG island CpG island 3597
Tssr110278 11 95587691 to 95587707 16 - TSS region transcription start site region 110278
Tssr3653 11 95611281 to 95611287 6 + TSS region transcription start site region 3653
Gm11528 11 95622660 to 95629836 7176 + lincRNA gene predicted gene 11528
Cpgi3598 11 95645365 to 95645994 629 CpG island CpG island 3598
Phb 11 95666957 to 95680773 13816 + protein coding gene prohibitin
Tssr104368 11 95666989 to 95667005 16 + TSS region transcription start site region 104368
Gm26830 11 95669952 to 95672719 2767 + lincRNA gene predicted gene, 26830
Gm29873 11 95681206 to 95687272 6066 - lncRNA gene predicted gene, 29873
Gm9796 11 95696894 to 95699143 2249 - lincRNA gene predicted gene 9796
Zfp652os 11 95700106 to 95712754 12648 - antisense lncRNA gene zinc finger protein 652, opposite strand
Cpgi3599 11 95712142 to 95712310 168 CpG island CpG island 3599
Cpgi3600 11 95712549 to 95713834 1285 CpG island CpG island 3600
Tssr104369 11 95712668 to 95712704 36 + TSS region transcription start site region 104369
Tssr110279 11 95712758 to 95712768 10 - TSS region transcription start site region 110279
Tssr104370 11 95712868 to 95712911 43 + TSS region transcription start site region 104370
Tssr104371 11 95712959 to 95712980 21 + TSS region transcription start site region 104371
Tssr104372 11 95712984 to 95713030 46 + TSS region transcription start site region 104372
Tssr104373 11 95713118 to 95713137 19 + TSS region transcription start site region 104373
Tssr104374 11 95716259 to 95716272 13 + TSS region transcription start site region 104374
Tssr104375 11 95716429 to 95716439 10 + TSS region transcription start site region 104375
B130006D01Rik 11 95723587 to 95726710 3123 + unclassified gene RIKEN cDNA B130006D01 gene
D11Mit263 11 95741636 to 95741780 144 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 263
Tssr104376 11 95748394 to 95748401 7 + TSS region transcription start site region 104376
Tssr104377 11 95748549 to 95748556 7 + TSS region transcription start site region 104377
Tssr104378 11 95748582 to 95748602 20 + TSS region transcription start site region 104378
Tssr104379 11 95748642 to 95748687 45 + TSS region transcription start site region 104379
Zfp652 11 95749067 to 95764715 15648 + protein coding gene zinc finger protein 652
Tssr104380 11 95751360 to 95751364 4 + TSS region transcription start site region 104380
Polr2k-ps 11 95761491 to 95761665 174 + pseudogene polymerase (RNA) II (DNA directed) polypeptide K, pseudogene
Tssr104381 11 95763618 to 95763631 13 + TSS region transcription start site region 104381
Tssr104382 11 95768316 to 95768357 41 + TSS region transcription start site region 104382
Tssr104383 11 95769753 to 95769757 4 + TSS region transcription start site region 104383
Gm38957 11 95776849 to 95789497 12648 + lncRNA gene predicted gene, 38957
D11Moh3 11 95777077 to 95777286 209 DNA segment DNA segment, Chr 11, KL Mohlke 3
Tssr104384 11 95777979 to 95778017 38 + TSS region transcription start site region 104384
Tssr104385 11 95778019 to 95778046 27 + TSS region transcription start site region 104385
Tssr104386 11 95778157 to 95778179 22 + TSS region transcription start site region 104386
D11Moh5 11 95792110 to 95792296 186 DNA segment DNA segment, Chr 11, KL Mohlke 5
Gm29933 11 95795228 to 95808604 13376 - lncRNA gene predicted gene, 29933
Cpgi3601 11 95796415 to 95797207 792 CpG island CpG island 3601
Tssr110280 11 95799814 to 95799816 2 - TSS region transcription start site region 110280
Tssr110281 11 95808596 to 95808619 23 - TSS region transcription start site region 110281
Tssr104387 11 95808752 to 95808765 13 + TSS region transcription start site region 104387
Cpgi3602 11 95823643 to 95825243 1600 CpG island CpG island 3602
Gm38958 11 95823955 to 95824580 625 - protein coding gene predicted gene, 38958
Tssr110282 11 95824405 to 95824416 11 - TSS region transcription start site region 110282
Tssr104388 11 95824469 to 95824512 43 + TSS region transcription start site region 104388
Phospho1 11 95824500 to 95832140 7640 + protein coding gene phosphatase, orphan 1
Tssr104389 11 95824513 to 95824549 36 + TSS region transcription start site region 104389
Tssr104390 11 95824578 to 95824593 15 + TSS region transcription start site region 104390
Tssr104391 11 95825135 to 95825149 14 + TSS region transcription start site region 104391
Tssr104392 11 95825159 to 95825179 20 + TSS region transcription start site region 104392
Tssr104393 11 95825221 to 95825240 19 + TSS region transcription start site region 104393
D11Moh6 11 95825499 to 95825727 228 DNA segment DNA segment, Chr 11, KL Mohlke 6
Abi3 11 95830074 to 95842476 12402 - protein coding gene ABI gene family, member 3
Cpgi3603 11 95830211 to 95831565 1354 CpG island CpG island 3603
Tssr3654 11 95830522 to 95830544 22 + TSS region transcription start site region 3654
Tssr104394 11 95830753 to 95830768 15 + TSS region transcription start site region 104394
Tssr104395 11 95831324 to 95831337 13 + TSS region transcription start site region 104395
Tssr104396 11 95831361 to 95831373 12 + TSS region transcription start site region 104396
Tssr104397 11 95831524 to 95831538 14 + TSS region transcription start site region 104397
Tssr110283 11 95831801 to 95831823 22 - TSS region transcription start site region 110283
Cpgi3604 11 95833671 to 95834623 952 CpG island CpG island 3604
Tssr110284 11 95834116 to 95834131 15 - TSS region transcription start site region 110284
Tssr110285 11 95834135 to 95834149 14 - TSS region transcription start site region 110285
Tssr110286 11 95834168 to 95834180 12 - TSS region transcription start site region 110286
Tssr110287 11 95835345 to 95835352 7 - TSS region transcription start site region 110287
Tssr110288 11 95837203 to 95837219 16 - TSS region transcription start site region 110288
Tssr104398 11 95837264 to 95837285 21 + TSS region transcription start site region 104398
Tssr110289 11 95837577 to 95837584 7 - TSS region transcription start site region 110289
Tssr104399 11 95837793 to 95837795 2 + TSS region transcription start site region 104399