Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:95180006-95500011

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3583 11 95201894 to 95202653 759 CpG island CpG island 3583
Cpgi3584 11 95210723 to 95210959 236 CpG island CpG island 3584
Cpgi3585 11 95223276 to 95223908 632 CpG island CpG island 3585
Gm11515 11 95223290 to 95225632 2342 - lincRNA gene predicted gene 11515
Tssr110260 11 95225535 to 95225541 6 - TSS region transcription start site region 110260
Tssr110261 11 95225631 to 95225634 3 - TSS region transcription start site region 110261
Cpgi3586 11 95231993 to 95232187 194 CpG island CpG island 3586
Cpgi3587 11 95258546 to 95259959 1413 CpG island CpG island 3587
Tac4 11 95261529 to 95269262 7733 + protein coding gene tachykinin 4
Kat7 11 95274259 to 95310246 35987 - protein coding gene K(lysine) acetyltransferase 7
Tssr110262 11 95274756 to 95274811 55 - TSS region transcription start site region 110262
Cpgi3588 11 95309417 to 95310631 1214 CpG island CpG island 3588
Tssr110263 11 95309557 to 95309586 29 - TSS region transcription start site region 110263
Tssr110264 11 95309682 to 95309712 30 - TSS region transcription start site region 110264
Tssr110265 11 95309718 to 95309732 14 - TSS region transcription start site region 110265
Tssr104352 11 95309870 to 95309911 41 + TSS region transcription start site region 104352
Tssr110266 11 95310186 to 95310213 27 - TSS region transcription start site region 110266
Tssr104353 11 95310304 to 95310338 34 + TSS region transcription start site region 104353
Gm11520 11 95322885 to 95324594 1709 + antisense lncRNA gene predicted gene 11520
Gm11521 11 95336011 to 95337408 1397 - antisense lncRNA gene predicted gene 11521
Cpgi3589 11 95336881 to 95337752 871 CpG island CpG island 3589
Tssr104354 11 95337012 to 95337026 14 + TSS region transcription start site region 104354
Fam117a 11 95337018 to 95381872 44854 + protein coding gene family with sequence similarity 117, member A
Tssr104355 11 95339925 to 95339938 13 + TSS region transcription start site region 104355
Tssr104356 11 95340006 to 95340011 5 + TSS region transcription start site region 104356
Tssr104357 11 95352737 to 95352741 4 + TSS region transcription start site region 104357
Tssr110267 11 95356709 to 95356722 13 - TSS region transcription start site region 110267
Tssr110268 11 95356794 to 95356838 44 - TSS region transcription start site region 110268
Gm29477 11 95375525 to 95384507 8982 - antisense lncRNA gene predicted gene 29477
Tssr104358 11 95377592 to 95377608 16 + TSS region transcription start site region 104358
Cpgi3590 11 95384336 to 95385173 837 CpG island CpG island 3590
Tssr104359 11 95384662 to 95384682 20 + TSS region transcription start site region 104359
Tssr104360 11 95384885 to 95384918 33 + TSS region transcription start site region 104360
Slc35b1 11 95384891 to 95391776 6885 + protein coding gene solute carrier family 35, member B1
Tssr104361 11 95384919 to 95384944 25 + TSS region transcription start site region 104361
Tssr104362 11 95384946 to 95384957 11 + TSS region transcription start site region 104362
D11Lis3 11 95413118 to 95413304 186 DNA segment DNA segment, Chr 11, Lisse 3
Cpgi3591 11 95413686 to 95415046 1360 CpG island CpG island 3591
Tssr104363 11 95413786 to 95413815 29 + TSS region transcription start site region 104363
Tssr104364 11 95414078 to 95414130 52 + TSS region transcription start site region 104364
Spop 11 95414080 to 95493406 79326 + protein coding gene speckle-type POZ protein
Tssr104365 11 95440494 to 95440500 6 + TSS region transcription start site region 104365
D11Moh33 11 95441624 to 95441787 163 DNA segment DNA segment, Chr 11, KL Mohlke 33
Gm11522 11 95462546 to 95462721 175 - pseudogene predicted gene 11522
Tssr104366 11 95480465 to 95480473 8 + TSS region transcription start site region 104366