Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:94952048-94992055

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Col1a1 11 94936224 to 94953042 16818 + protein coding gene collagen, type I, alpha 1
Tssr104297 11 94952055 to 94952064 9 + TSS region transcription start site region 104297
Tssr104298 11 94952093 to 94952098 5 + TSS region transcription start site region 104298
Tssr104299 11 94952121 to 94952132 11 + TSS region transcription start site region 104299
Tssr104300 11 94952141 to 94952152 11 + TSS region transcription start site region 104300
Tssr104301 11 94952265 to 94952272 7 + TSS region transcription start site region 104301
Tssr104302 11 94952277 to 94952286 9 + TSS region transcription start site region 104302
Tssr104303 11 94952291 to 94952305 14 + TSS region transcription start site region 104303
Tssr104304 11 94952330 to 94952347 17 + TSS region transcription start site region 104304
Tssr104305 11 94952355 to 94952369 14 + TSS region transcription start site region 104305
Tssr104306 11 94952370 to 94952384 14 + TSS region transcription start site region 104306
Tssr104307 11 94952386 to 94952401 15 + TSS region transcription start site region 104307
Tssr104308 11 94952456 to 94952474 18 + TSS region transcription start site region 104308
Tssr104309 11 94952476 to 94952498 22 + TSS region transcription start site region 104309
Tssr104310 11 94952521 to 94952584 63 + TSS region transcription start site region 104310
Tssr104311 11 94952617 to 94952633 16 + TSS region transcription start site region 104311
Tssr104312 11 94952687 to 94952702 15 + TSS region transcription start site region 104312
Tssr104313 11 94952703 to 94952718 15 + TSS region transcription start site region 104313
Tssr104314 11 94953119 to 94953123 4 + TSS region transcription start site region 104314
D11Lis1 11 94953318 to 94953469 151 DNA segment DNA segment, Chr 11, Lisse 1
Tssr104315 11 94955409 to 94955419 10 + TSS region transcription start site region 104315
Gm24877 11 94958778 to 94958893 115 + unclassified non-coding RNA gene predicted gene, 24877
Sgca 11 94962791 to 94976327 13536 - protein coding gene sarcoglycan, alpha (dystrophin-associated glycoprotein)
Tssr104316 11 94967589 to 94967612 23 + TSS region transcription start site region 104316
Hils1 11 94967593 to 94968456 863 + protein coding gene histone H1-like protein in spermatids 1
Tssr104317 11 94967622 to 94967639 17 + TSS region transcription start site region 104317
Tssr110231 11 94972048 to 94972055 7 - TSS region transcription start site region 110231
Tssr110232 11 94973447 to 94973471 24 - TSS region transcription start site region 110232
Tssr110233 11 94976177 to 94976179 2 - TSS region transcription start site region 110233
Tssr110234 11 94976332 to 94976339 7 - TSS region transcription start site region 110234
Tssr110235 11 94976348 to 94976359 11 - TSS region transcription start site region 110235
Tssr110236 11 94976368 to 94976399 31 - TSS region transcription start site region 110236
Tssr110237 11 94976402 to 94976423 21 - TSS region transcription start site region 110237
Cpgi3568 11 94978940 to 94979328 388 CpG island CpG island 3568
Cpgi3569 11 94990698 to 94993118 2420 CpG island CpG island 3569
Tssr104318 11 94990759 to 94990797 38 + TSS region transcription start site region 104318
Tssr104319 11 94990924 to 94990970 46 + TSS region transcription start site region 104319
Tssr104320 11 94990971 to 94990995 24 + TSS region transcription start site region 104320
Tssr104321 11 94990996 to 94991012 16 + TSS region transcription start site region 104321
Tssr3648 11 94991042 to 94991090 48 + TSS region transcription start site region 3648
Tssr3649 11 94991171 to 94991172 1 - TSS region transcription start site region 3649
Tssr3650 11 94991185 to 94991219 34 + TSS region transcription start site region 3650
Ppp1r9b 11 94991212 to 95006898 15686 + protein coding gene protein phosphatase 1, regulatory subunit 9B
Tssr104322 11 94991374 to 94991388 14 + TSS region transcription start site region 104322