Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:94921713-94981720

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124 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46293 11 94928561 to 94934616 6055 - lncRNA gene predicted gene, 46293
Cpgi3566 11 94936070 to 94936346 276 CpG island CpG island 3566
Col1a1 11 94936224 to 94953042 16818 + protein coding gene collagen, type I, alpha 1
Tssr104226 11 94936246 to 94936260 14 + TSS region transcription start site region 104226
Tssr104227 11 94937582 to 94937603 21 + TSS region transcription start site region 104227
Tssr104228 11 94937903 to 94937946 43 + TSS region transcription start site region 104228
Tssr104229 11 94937952 to 94938055 103 + TSS region transcription start site region 104229
Cpgi3567 11 94937960 to 94938146 186 CpG island CpG island 3567
Tssr110217 11 94937977 to 94937988 11 - TSS region transcription start site region 110217
Tssr110218 11 94938030 to 94938093 63 - TSS region transcription start site region 110218
Tssr104230 11 94938064 to 94938078 14 + TSS region transcription start site region 104230
Tssr110219 11 94938249 to 94938260 11 - TSS region transcription start site region 110219
Tssr104231 11 94938499 to 94938538 39 + TSS region transcription start site region 104231
Tssr104232 11 94938565 to 94938587 22 + TSS region transcription start site region 104232
Tssr3646 11 94939102 to 94939127 25 + TSS region transcription start site region 3646
Tssr104233 11 94939383 to 94939430 47 + TSS region transcription start site region 104233
Tssr104234 11 94939692 to 94939718 26 + TSS region transcription start site region 104234
Tssr104235 11 94939900 to 94939928 28 + TSS region transcription start site region 104235
Tssr104236 11 94942005 to 94942047 42 + TSS region transcription start site region 104236
Tssr104237 11 94942379 to 94942410 31 + TSS region transcription start site region 104237
Tssr104238 11 94942791 to 94942822 31 + TSS region transcription start site region 104238
Tssr110220 11 94942836 to 94942877 41 - TSS region transcription start site region 110220
Tssr104239 11 94943580 to 94943614 34 + TSS region transcription start site region 104239
Tssr104240 11 94943720 to 94943736 16 + TSS region transcription start site region 104240
Tssr104241 11 94943739 to 94943777 38 + TSS region transcription start site region 104241
Tssr104242 11 94944351 to 94944385 34 + TSS region transcription start site region 104242
Tssr110221 11 94944625 to 94944641 16 - TSS region transcription start site region 110221
Tssr104243 11 94944746 to 94944782 36 + TSS region transcription start site region 104243
Tssr104244 11 94944905 to 94944936 31 + TSS region transcription start site region 104244
Tssr104245 11 94945362 to 94945387 25 + TSS region transcription start site region 104245
Tssr104246 11 94945559 to 94945579 20 + TSS region transcription start site region 104246
Tssr104247 11 94945803 to 94945832 29 + TSS region transcription start site region 104247
Tssr104248 11 94946309 to 94946317 8 + TSS region transcription start site region 104248
Tssr104249 11 94946769 to 94946804 35 + TSS region transcription start site region 104249
Tssr104250 11 94947109 to 94947145 36 + TSS region transcription start site region 104250
Tssr104251 11 94947630 to 94947635 5 + TSS region transcription start site region 104251
Tssr104252 11 94947661 to 94947673 12 + TSS region transcription start site region 104252
Tssr104253 11 94947705 to 94947737 32 + TSS region transcription start site region 104253
Tssr104254 11 94947877 to 94947900 23 + TSS region transcription start site region 104254
Tssr104255 11 94947905 to 94947942 37 + TSS region transcription start site region 104255
Tssr104256 11 94948328 to 94948354 26 + TSS region transcription start site region 104256
Tssr104257 11 94948363 to 94948388 25 + TSS region transcription start site region 104257
Tssr104258 11 94948537 to 94948571 34 + TSS region transcription start site region 104258
Tssr104259 11 94948713 to 94948733 20 + TSS region transcription start site region 104259
Tssr104260 11 94948734 to 94948785 51 + TSS region transcription start site region 104260
Tssr104261 11 94949370 to 94949434 64 + TSS region transcription start site region 104261
Tssr104262 11 94950090 to 94950174 84 + TSS region transcription start site region 104262
Tssr104263 11 94950286 to 94950307 21 + TSS region transcription start site region 104263
Tssr104264 11 94950310 to 94950329 19 + TSS region transcription start site region 104264
Tssr104265 11 94950335 to 94950355 20 + TSS region transcription start site region 104265
Tssr104266 11 94950357 to 94950367 10 + TSS region transcription start site region 104266
Tssr104267 11 94950388 to 94950434 46 + TSS region transcription start site region 104267
Tssr104268 11 94950438 to 94950462 24 + TSS region transcription start site region 104268
Tssr104269 11 94950472 to 94950475 3 + TSS region transcription start site region 104269
Tssr104270 11 94950481 to 94950496 15 + TSS region transcription start site region 104270
Tssr104271 11 94950497 to 94950550 53 + TSS region transcription start site region 104271
Tssr104272 11 94950703 to 94950744 41 + TSS region transcription start site region 104272
Tssr104273 11 94950749 to 94950838 89 + TSS region transcription start site region 104273
Tssr110222 11 94950842 to 94950898 56 - TSS region transcription start site region 110222
Tssr104274 11 94950849 to 94950856 7 + TSS region transcription start site region 104274
Tssr104275 11 94950861 to 94950865 4 + TSS region transcription start site region 104275
Tssr104276 11 94950871 to 94950876 5 + TSS region transcription start site region 104276
Tssr104277 11 94951105 to 94951150 45 + TSS region transcription start site region 104277
Tssr104278 11 94951157 to 94951171 14 + TSS region transcription start site region 104278
Tssr104279 11 94951174 to 94951228 54 + TSS region transcription start site region 104279
Tssr110223 11 94951211 to 94951257 46 - TSS region transcription start site region 110223
Tssr104280 11 94951229 to 94951240 11 + TSS region transcription start site region 104280
Tssr104281 11 94951243 to 94951254 11 + TSS region transcription start site region 104281
Tssr104282 11 94951289 to 94951324 35 + TSS region transcription start site region 104282
Tssr110224 11 94951296 to 94951321 25 - TSS region transcription start site region 110224
Tssr104283 11 94951461 to 94951477 16 + TSS region transcription start site region 104283
Tssr104284 11 94951486 to 94951537 51 + TSS region transcription start site region 104284
Tssr110225 11 94951509 to 94951537 28 - TSS region transcription start site region 110225
Tssr110226 11 94951542 to 94951577 35 - TSS region transcription start site region 110226
Tssr104285 11 94951555 to 94951567 12 + TSS region transcription start site region 104285
Tssr104286 11 94951577 to 94951600 23 + TSS region transcription start site region 104286
Tssr110227 11 94951581 to 94951590 9 - TSS region transcription start site region 110227
Tssr110228 11 94951593 to 94951650 57 - TSS region transcription start site region 110228
Tssr104287 11 94951604 to 94951624 20 + TSS region transcription start site region 104287
Tssr104288 11 94951626 to 94951664 38 + TSS region transcription start site region 104288
Tssr110229 11 94951653 to 94951670 17 - TSS region transcription start site region 110229
Tssr104289 11 94951667 to 94951672 5 + TSS region transcription start site region 104289
Tssr110230 11 94951684 to 94951707 23 - TSS region transcription start site region 110230
Tssr104290 11 94951713 to 94951720 7 + TSS region transcription start site region 104290
Tssr104291 11 94951722 to 94951735 13 + TSS region transcription start site region 104291
Tssr104292 11 94951760 to 94951832 72 + TSS region transcription start site region 104292
Tssr104293 11 94951908 to 94951939 31 + TSS region transcription start site region 104293
Tssr104294 11 94951945 to 94951973 28 + TSS region transcription start site region 104294
Tssr3647 11 94951981 to 94951984 3 + TSS region transcription start site region 3647
Tssr104295 11 94952003 to 94952017 14 + TSS region transcription start site region 104295
Tssr104296 11 94952022 to 94952041 19 + TSS region transcription start site region 104296
Tssr104297 11 94952055 to 94952064 9 + TSS region transcription start site region 104297
Tssr104298 11 94952093 to 94952098 5 + TSS region transcription start site region 104298
Tssr104299 11 94952121 to 94952132 11 + TSS region transcription start site region 104299
Tssr104300 11 94952141 to 94952152 11 + TSS region transcription start site region 104300
Tssr104301 11 94952265 to 94952272 7 + TSS region transcription start site region 104301
Tssr104302 11 94952277 to 94952286 9 + TSS region transcription start site region 104302
Tssr104303 11 94952291 to 94952305 14 + TSS region transcription start site region 104303
Tssr104304 11 94952330 to 94952347 17 + TSS region transcription start site region 104304
Tssr104305 11 94952355 to 94952369 14 + TSS region transcription start site region 104305
Tssr104306 11 94952370 to 94952384 14 + TSS region transcription start site region 104306
Tssr104307 11 94952386 to 94952401 15 + TSS region transcription start site region 104307
Tssr104308 11 94952456 to 94952474 18 + TSS region transcription start site region 104308
Tssr104309 11 94952476 to 94952498 22 + TSS region transcription start site region 104309
Tssr104310 11 94952521 to 94952584 63 + TSS region transcription start site region 104310
Tssr104311 11 94952617 to 94952633 16 + TSS region transcription start site region 104311
Tssr104312 11 94952687 to 94952702 15 + TSS region transcription start site region 104312
Tssr104313 11 94952703 to 94952718 15 + TSS region transcription start site region 104313
Tssr104314 11 94953119 to 94953123 4 + TSS region transcription start site region 104314
D11Lis1 11 94953318 to 94953469 151 DNA segment DNA segment, Chr 11, Lisse 1
Tssr104315 11 94955409 to 94955419 10 + TSS region transcription start site region 104315
Gm24877 11 94958778 to 94958893 115 + unclassified non-coding RNA gene predicted gene, 24877
Sgca 11 94962791 to 94976327 13536 - protein coding gene sarcoglycan, alpha (dystrophin-associated glycoprotein)
Tssr104316 11 94967589 to 94967612 23 + TSS region transcription start site region 104316
Hils1 11 94967593 to 94968456 863 + protein coding gene histone H1-like protein in spermatids 1
Tssr104317 11 94967622 to 94967639 17 + TSS region transcription start site region 104317
Tssr110231 11 94972048 to 94972055 7 - TSS region transcription start site region 110231
Tssr110232 11 94973447 to 94973471 24 - TSS region transcription start site region 110232
Tssr110233 11 94976177 to 94976179 2 - TSS region transcription start site region 110233
Tssr110234 11 94976332 to 94976339 7 - TSS region transcription start site region 110234
Tssr110235 11 94976348 to 94976359 11 - TSS region transcription start site region 110235
Tssr110236 11 94976368 to 94976399 31 - TSS region transcription start site region 110236
Tssr110237 11 94976402 to 94976423 21 - TSS region transcription start site region 110237
Cpgi3568 11 94978940 to 94979328 388 CpG island CpG island 3568