Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:94708186-94948930

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3564 11 94741837 to 94742681 844 CpG island CpG island 3564
Cdc34b 11 94741837 to 94743014 1177 + protein coding gene cell division cycle 34B
Tssr104225 11 94742116 to 94742145 29 + TSS region transcription start site region 104225
Gm11545 11 94756976 to 94757763 787 - pseudogene predicted gene 11545
Tssr110212 11 94760911 to 94760917 6 - TSS region transcription start site region 110212
Tssr110213 11 94760935 to 94760959 24 - TSS region transcription start site region 110213
Tssr110214 11 94761179 to 94761183 4 - TSS region transcription start site region 110214
Tmem92 11 94777217 to 94782703 5486 - protein coding gene transmembrane protein 92
Tssr110215 11 94782700 to 94782705 5 - TSS region transcription start site region 110215
Gm11546 11 94797049 to 94797777 728 - pseudogene predicted gene 11546
AA623943 11 94812619 to 94813348 729 - pseudogene expressed sequence AA623943
Gm11543 11 94828186 to 94828930 744 - pseudogene predicted gene 11543
Tssr110216 11 94831999 to 94832004 5 - TSS region transcription start site region 110216
Gm11544 11 94845358 to 94846092 734 - pseudogene predicted gene 11544
A430060F13Rik 11 94861018 to 94861759 741 - pseudogene RIKEN cDNA A430060F13 gene
Cpgi3565 11 94872895 to 94873280 385 CpG island CpG island 3565
D11Dcr18 11 94880152 to 94880279 127 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 18
D11Mit289 11 94880152 to 94880273 121 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 289
Moe1 11 94880152 to 94880273 121 QTL modifier of epilepsy 1
Gm22456 11 94919709 to 94919833 124 + snRNA gene predicted gene, 22456
Gm46293 11 94928561 to 94934616 6055 - lncRNA gene predicted gene, 46293
Cpgi3566 11 94936070 to 94936346 276 CpG island CpG island 3566
Col1a1 11 94936224 to 94953042 16818 + protein coding gene collagen, type I, alpha 1
Tssr104226 11 94936246 to 94936260 14 + TSS region transcription start site region 104226
Tssr104227 11 94937582 to 94937603 21 + TSS region transcription start site region 104227
Tssr104228 11 94937903 to 94937946 43 + TSS region transcription start site region 104228
Tssr104229 11 94937952 to 94938055 103 + TSS region transcription start site region 104229
Cpgi3567 11 94937960 to 94938146 186 CpG island CpG island 3567
Tssr110217 11 94937977 to 94937988 11 - TSS region transcription start site region 110217
Tssr110218 11 94938030 to 94938093 63 - TSS region transcription start site region 110218
Tssr104230 11 94938064 to 94938078 14 + TSS region transcription start site region 104230
Tssr110219 11 94938249 to 94938260 11 - TSS region transcription start site region 110219
Tssr104231 11 94938499 to 94938538 39 + TSS region transcription start site region 104231
Tssr104232 11 94938565 to 94938587 22 + TSS region transcription start site region 104232
Tssr3646 11 94939102 to 94939127 25 + TSS region transcription start site region 3646
Tssr104233 11 94939383 to 94939430 47 + TSS region transcription start site region 104233
Tssr104234 11 94939692 to 94939718 26 + TSS region transcription start site region 104234
Tssr104235 11 94939900 to 94939928 28 + TSS region transcription start site region 104235
Tssr104236 11 94942005 to 94942047 42 + TSS region transcription start site region 104236
Tssr104237 11 94942379 to 94942410 31 + TSS region transcription start site region 104237
Tssr104238 11 94942791 to 94942822 31 + TSS region transcription start site region 104238
Tssr110220 11 94942836 to 94942877 41 - TSS region transcription start site region 110220
Tssr104239 11 94943580 to 94943614 34 + TSS region transcription start site region 104239
Tssr104240 11 94943720 to 94943736 16 + TSS region transcription start site region 104240
Tssr104241 11 94943739 to 94943777 38 + TSS region transcription start site region 104241
Tssr104242 11 94944351 to 94944385 34 + TSS region transcription start site region 104242
Tssr110221 11 94944625 to 94944641 16 - TSS region transcription start site region 110221
Tssr104243 11 94944746 to 94944782 36 + TSS region transcription start site region 104243
Tssr104244 11 94944905 to 94944936 31 + TSS region transcription start site region 104244
Tssr104245 11 94945362 to 94945387 25 + TSS region transcription start site region 104245
Tssr104246 11 94945559 to 94945579 20 + TSS region transcription start site region 104246
Tssr104247 11 94945803 to 94945832 29 + TSS region transcription start site region 104247
Tssr104248 11 94946309 to 94946317 8 + TSS region transcription start site region 104248
Tssr104249 11 94946769 to 94946804 35 + TSS region transcription start site region 104249
Tssr104250 11 94947109 to 94947145 36 + TSS region transcription start site region 104250
Tssr104251 11 94947630 to 94947635 5 + TSS region transcription start site region 104251
Tssr104252 11 94947661 to 94947673 12 + TSS region transcription start site region 104252
Tssr104253 11 94947705 to 94947737 32 + TSS region transcription start site region 104253
Tssr104254 11 94947877 to 94947900 23 + TSS region transcription start site region 104254
Tssr104255 11 94947905 to 94947942 37 + TSS region transcription start site region 104255
Tssr104256 11 94948328 to 94948354 26 + TSS region transcription start site region 104256
Tssr104257 11 94948363 to 94948388 25 + TSS region transcription start site region 104257
Tssr104258 11 94948537 to 94948571 34 + TSS region transcription start site region 104258
Tssr104259 11 94948713 to 94948733 20 + TSS region transcription start site region 104259
Tssr104260 11 94948734 to 94948785 51 + TSS region transcription start site region 104260