Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:94564395-94724410

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dp(11Mpo-Chad)18Brd 11 87793784 to 94569127 6775343 chromosomal duplication duplication, Chr 11, Bradley 18
Del(11Mpo-Chad)18Brd 11 87793784 to 94569127 6775343 cytogenetic marker deletion, Chr 11, Bradley 18
Acsf2 11 94557102 to 94601871 44769 - protein coding gene acyl-CoA synthetase family member 2
Cpgi3558 11 94564511 to 94565519 1008 CpG island CpG island 3558
Tssr104209 11 94564869 to 94564886 17 + TSS region transcription start site region 104209
Tssr104210 11 94565039 to 94565056 17 + TSS region transcription start site region 104210
Chad 11 94565074 to 94569127 4053 + protein coding gene chondroadherin
Del(11Chad-Hoxb1)19Brd 11 94565074 to 96368256 1803182 complex/cluster/region deletion, Chr 11, Bradley 19
Tssr104211 11 94565415 to 94565443 28 + TSS region transcription start site region 104211
Tssr110201 11 94570541 to 94570551 10 - TSS region transcription start site region 110201
Cpgi3559 11 94601340 to 94602217 877 CpG island CpG island 3559
Tssr110202 11 94601796 to 94601822 26 - TSS region transcription start site region 110202
Tssr110203 11 94601825 to 94601851 26 - TSS region transcription start site region 110203
Tssr110204 11 94601862 to 94601873 11 - TSS region transcription start site region 110204
Tssr110205 11 94601883 to 94601895 12 - TSS region transcription start site region 110205
Tssr110206 11 94601965 to 94601983 18 - TSS region transcription start site region 110206
Gm11540 11 94607402 to 94609036 1634 + pseudogene predicted gene 11540
Cpgi3560 11 94629550 to 94630383 833 CpG island CpG island 3560
Tssr104212 11 94629741 to 94629834 93 + TSS region transcription start site region 104212
Lrrc59 11 94629824 to 94645216 15392 + protein coding gene leucine rich repeat containing 59
Tssr104213 11 94638843 to 94638865 22 + TSS region transcription start site region 104213
Tssr104214 11 94641310 to 94641328 18 + TSS region transcription start site region 104214
Tssr104215 11 94644132 to 94644166 34 + TSS region transcription start site region 104215
Tssr104216 11 94644370 to 94644386 16 + TSS region transcription start site region 104216
Tssr104217 11 94644395 to 94644410 15 + TSS region transcription start site region 104217
Tssr104218 11 94644645 to 94644669 24 + TSS region transcription start site region 104218
Tssr104219 11 94644887 to 94644950 63 + TSS region transcription start site region 104219
Eme1 11 94644998 to 94653785 8787 - protein coding gene essential meiotic structure-specific endonuclease 1
Tssr104220 11 94645270 to 94645272 2 + TSS region transcription start site region 104220
Cpgi3561 11 94653659 to 94654089 430 CpG island CpG island 3561
Tssr110207 11 94653687 to 94653707 20 - TSS region transcription start site region 110207
Tssr110208 11 94653714 to 94653761 47 - TSS region transcription start site region 110208
Mrpl27 11 94653767 to 94660089 6322 + protein coding gene mitochondrial ribosomal protein L27
Tssr110209 11 94653922 to 94653942 20 - TSS region transcription start site region 110209
Tssr104221 11 94654004 to 94654027 23 + TSS region transcription start site region 104221
Tssr104222 11 94654032 to 94654053 21 + TSS region transcription start site region 104222
Xylt2 11 94663851 to 94677515 13664 - protein coding gene xylosyltransferase II
Cpgi3562 11 94676500 to 94677889 1389 CpG island CpG island 3562
Tssr3645 11 94677357 to 94677379 22 - TSS region transcription start site region 3645
Tssr110210 11 94677404 to 94677496 92 - TSS region transcription start site region 110210
Gm11542 11 94677565 to 94687664 10099 + unclassified non-coding RNA gene predicted gene 11542
Tssr104223 11 94677578 to 94677632 54 + TSS region transcription start site region 104223
Tssr104224 11 94681810 to 94681815 5 + TSS region transcription start site region 104224
Tssr110211 11 94692544 to 94692576 32 - TSS region transcription start site region 110211
Gm11541 11 94694498 to 94704499 10001 - protein coding gene predicted gene 11541
Cpgi3563 11 94701422 to 94701651 229 CpG island CpG island 3563