Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:94368391-94514198

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Abcc3 11 94343295 to 94392997 49702 - protein coding gene ATP-binding cassette, sub-family C (CFTR/MRP), member 3
Tssr110169 11 94371740 to 94371752 12 - TSS region transcription start site region 110169
Tssr110170 11 94375112 to 94375135 23 - TSS region transcription start site region 110170
Cpgi3550 11 94392660 to 94392957 297 CpG island CpG island 3550
Tssr110171 11 94392917 to 94392983 66 - TSS region transcription start site region 110171
Cacna1g 11 94408391 to 94474198 65807 - protein coding gene calcium channel, voltage-dependent, T type, alpha 1G subunit
Tssr110172 11 94451835 to 94451863 28 - TSS region transcription start site region 110172
Tssr110173 11 94456460 to 94456469 9 - TSS region transcription start site region 110173
Cpgi3551 11 94472798 to 94475011 2213 CpG island CpG island 3551
Tssr110174 11 94473928 to 94473968 40 - TSS region transcription start site region 110174
Tssr110175 11 94474052 to 94474069 17 - TSS region transcription start site region 110175
Tssr110176 11 94474088 to 94474112 24 - TSS region transcription start site region 110176
Tssr110177 11 94474297 to 94474308 11 - TSS region transcription start site region 110177
Tssr110178 11 94474324 to 94474347 23 - TSS region transcription start site region 110178
Tssr110179 11 94474358 to 94474385 27 - TSS region transcription start site region 110179
Tssr110180 11 94474386 to 94474404 18 - TSS region transcription start site region 110180
Spata20 11 94478904 to 94485310 6406 - protein coding gene spermatogenesis associated 20
Cpgi3552 11 94483452 to 94483667 215 CpG island CpG island 3552
Tssr110181 11 94485275 to 94485281 6 - TSS region transcription start site region 110181
Tssr110182 11 94485290 to 94485327 37 - TSS region transcription start site region 110182
Tssr110183 11 94485331 to 94485356 25 - TSS region transcription start site region 110183
Cpgi3553 11 94485969 to 94486370 401 CpG island CpG island 3553
Tssr110184 11 94486211 to 94486221 10 - TSS region transcription start site region 110184
Tssr110185 11 94486224 to 94486234 10 - TSS region transcription start site region 110185
Tssr110186 11 94486242 to 94486264 22 - TSS region transcription start site region 110186
Epn3 11 94489599 to 94499974 10375 - protein coding gene epsin 3
Cpgi3554 11 94490871 to 94491760 889 CpG island CpG island 3554
Tssr110187 11 94491344 to 94491372 28 - TSS region transcription start site region 110187
Tssr110188 11 94498170 to 94498191 21 - TSS region transcription start site region 110188
Tssr110189 11 94498193 to 94498207 14 - TSS region transcription start site region 110189
Cpgi3555 11 94499756 to 94500113 357 CpG island CpG island 3555
Tssr110190 11 94499883 to 94499959 76 - TSS region transcription start site region 110190
Tssr110191 11 94499962 to 94500002 40 - TSS region transcription start site region 110191
Mycbpap 11 94501347 to 94521742 20395 - protein coding gene MYCBP associated protein
Gm35650 11 94507162 to 94518588 11426 + lncRNA gene predicted gene, 35650
Tssr110192 11 94507288 to 94507299 11 - TSS region transcription start site region 110192
Tssr110193 11 94507337 to 94507345 8 - TSS region transcription start site region 110193
Tssr104206 11 94507436 to 94507451 15 + TSS region transcription start site region 104206
Tssr104207 11 94507460 to 94507474 14 + TSS region transcription start site region 104207
Tssr104208 11 94507488 to 94507500 12 + TSS region transcription start site region 104208
Tssr110194 11 94508347 to 94508349 2 - TSS region transcription start site region 110194
Tssr110195 11 94509796 to 94509797 1 - TSS region transcription start site region 110195
Tssr110196 11 94509813 to 94509825 12 - TSS region transcription start site region 110196