Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:94065274-94357387

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89 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stzid3 11 63428581 to 94173092 30744511 QTL streptozotocin induced diabetes susceptibility 3
Spag9 11 93996091 to 94126085 129994 + protein coding gene sperm associated antigen 9
Gm38951 11 94069679 to 94074488 4809 - lncRNA gene predicted gene, 38951
Tssr104172 11 94076392 to 94076421 29 + TSS region transcription start site region 104172
Tssr104173 11 94081328 to 94081374 46 + TSS region transcription start site region 104173
Tssr104174 11 94111623 to 94111632 9 + TSS region transcription start site region 104174
Tssr3643 11 94133426 to 94133469 43 + TSS region transcription start site region 3643
Tssr104175 11 94133479 to 94133490 11 + TSS region transcription start site region 104175
B230206L02Rik 11 94133485 to 94155776 22291 + unclassified non-coding RNA gene RIKEN cDNA B230206L02 gene
Tssr104176 11 94137671 to 94137682 11 + TSS region transcription start site region 104176
Tssr104177 11 94139917 to 94139920 3 + TSS region transcription start site region 104177
Gm35338 11 94140269 to 94172671 32402 - lncRNA gene predicted gene, 35338
Cpgi3543 11 94148840 to 94149637 797 CpG island CpG island 3543
Tssr110133 11 94172368 to 94172372 4 - TSS region transcription start site region 110133
Par8 11 94172953 to 94173092 139 QTL pulmonary adenoma resistance 8
Par1 11 94172953 to 96276595 2103642 QTL pulmonary adenoma resistance 1
D11Mit70 11 94172953 to 94173092 139 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 70
Tssr110134 11 94180319 to 94180342 23 - TSS region transcription start site region 110134
Tssr110135 11 94202194 to 94202203 9 - TSS region transcription start site region 110135
Tssr104178 11 94209828 to 94209852 24 + TSS region transcription start site region 104178
Tssr104179 11 94209869 to 94209898 29 + TSS region transcription start site region 104179
Cpgi3544 11 94210274 to 94212387 2113 CpG island CpG island 3544
Tssr104180 11 94210404 to 94210436 32 + TSS region transcription start site region 104180
Tssr104181 11 94210439 to 94210454 15 + TSS region transcription start site region 104181
Tssr104182 11 94211431 to 94211446 15 + TSS region transcription start site region 104182
Tob1 11 94211454 to 94215495 4041 + protein coding gene transducer of ErbB-2.1
Tssr104183 11 94213817 to 94213834 17 + TSS region transcription start site region 104183
Cpgi3545 11 94213852 to 94214109 257 CpG island CpG island 3545
Tssr104184 11 94213977 to 94213989 12 + TSS region transcription start site region 104184
Tssr104185 11 94214557 to 94214591 34 + TSS region transcription start site region 104185
Tssr104186 11 94214806 to 94214817 11 + TSS region transcription start site region 104186
Tssr104187 11 94214827 to 94214838 11 + TSS region transcription start site region 104187
Wfikkn2 11 94235956 to 94246005 10049 - protein coding gene WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2
Tssr110136 11 94242656 to 94242664 8 - TSS region transcription start site region 110136
Tssr110137 11 94242701 to 94242729 28 - TSS region transcription start site region 110137
Tssr110138 11 94242733 to 94242759 26 - TSS region transcription start site region 110138
Tssr110139 11 94242905 to 94242929 24 - TSS region transcription start site region 110139
Tssr110140 11 94242939 to 94242956 17 - TSS region transcription start site region 110140
Tssr110141 11 94253844 to 94253878 34 - TSS region transcription start site region 110141
Gm38953 11 94269956 to 94271397 1441 - lncRNA gene predicted gene, 38953
Gm38956 11 94271439 to 94277877 6438 - lncRNA gene predicted gene, 38956
Cpgi3546 11 94276962 to 94277359 397 CpG island CpG island 3546
Tssr104188 11 94281831 to 94281865 34 + TSS region transcription start site region 104188
Gm21885 11 94281873 to 94286253 4380 + protein coding gene predicted gene, 21885
Luc7l3 11 94291137 to 94321985 30848 - protein coding gene LUC7-like 3 (S. cerevisiae)
Tssr110142 11 94295090 to 94295094 4 - TSS region transcription start site region 110142
Tssr110143 11 94296963 to 94296983 20 - TSS region transcription start site region 110143
Tssr104189 11 94297009 to 94297048 39 + TSS region transcription start site region 104189
Tssr110144 11 94297123 to 94297138 15 - TSS region transcription start site region 110144
Tssr110145 11 94297783 to 94297819 36 - TSS region transcription start site region 110145
Tssr110146 11 94297821 to 94297836 15 - TSS region transcription start site region 110146
Tssr110147 11 94297840 to 94297887 47 - TSS region transcription start site region 110147
Tssr110148 11 94299977 to 94300068 91 - TSS region transcription start site region 110148
Tssr110149 11 94301572 to 94301585 13 - TSS region transcription start site region 110149
Tssr110150 11 94302480 to 94302483 3 - TSS region transcription start site region 110150
Tssr110151 11 94303868 to 94303891 23 - TSS region transcription start site region 110151
Tssr110152 11 94303928 to 94303948 20 - TSS region transcription start site region 110152
Tssr110153 11 94305295 to 94305299 4 - TSS region transcription start site region 110153
Tssr110154 11 94309648 to 94309667 19 - TSS region transcription start site region 110154
Tssr110155 11 94309684 to 94309697 13 - TSS region transcription start site region 110155
Tssr3644 11 94317670 to 94317686 16 - TSS region transcription start site region 3644
Cpgi3547 11 94321147 to 94322456 1309 CpG island CpG island 3547
Tssr110156 11 94321443 to 94321494 51 - TSS region transcription start site region 110156
Tssr110157 11 94321898 to 94321909 11 - TSS region transcription start site region 110157
Tssr110158 11 94321910 to 94321943 33 - TSS region transcription start site region 110158
Tssr110159 11 94321957 to 94321968 11 - TSS region transcription start site region 110159
Tssr104190 11 94322076 to 94322108 32 + TSS region transcription start site region 104190
Cpgi3548 11 94327795 to 94328629 834 CpG island CpG island 3548
Tssr104191 11 94327984 to 94328029 45 + TSS region transcription start site region 104191
Ankrd40 11 94328001 to 94341841 13840 + protein coding gene ankyrin repeat domain 40
Tssr104192 11 94328037 to 94328064 27 + TSS region transcription start site region 104192
Tssr104193 11 94328067 to 94328077 10 + TSS region transcription start site region 104193
Tssr104194 11 94328080 to 94328089 9 + TSS region transcription start site region 104194
Tssr104195 11 94328097 to 94328108 11 + TSS region transcription start site region 104195
Tssr104196 11 94328146 to 94328176 30 + TSS region transcription start site region 104196
Tssr104197 11 94328220 to 94328238 18 + TSS region transcription start site region 104197
Tssr104198 11 94328242 to 94328261 19 + TSS region transcription start site region 104198
Tssr104199 11 94328262 to 94328278 16 + TSS region transcription start site region 104199
Tssr104200 11 94329642 to 94329650 8 + TSS region transcription start site region 104200
Tssr104201 11 94339844 to 94339855 11 + TSS region transcription start site region 104201
Abcc3 11 94343295 to 94392997 49702 - protein coding gene ATP-binding cassette, sub-family C (CFTR/MRP), member 3
Tssr110160 11 94346132 to 94346157 25 - TSS region transcription start site region 110160
Tssr110161 11 94351346 to 94351350 4 - TSS region transcription start site region 110161
Cpgi3549 11 94351810 to 94352215 405 CpG island CpG island 3549
Tssr110162 11 94352102 to 94352129 27 - TSS region transcription start site region 110162
Tssr110163 11 94352144 to 94352153 9 - TSS region transcription start site region 110163
Tssr104202 11 94352169 to 94352192 23 + TSS region transcription start site region 104202
Tssr104203 11 94352200 to 94352211 11 + TSS region transcription start site region 104203
Pregq2 11 118131898 to 94172953 -23958945 QTL pregnancy QTL 2