Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:9116942-9759259

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr100322 11 9117952 to 9117990 38 + TSS region transcription start site region 100322
Tssr100323 11 9117998 to 9118017 19 + TSS region transcription start site region 100323
Tssr100324 11 9118070 to 9118091 21 + TSS region transcription start site region 100324
Tssr3423 11 9118098 to 9118133 35 + TSS region transcription start site region 3423
Upp1 11 9118103 to 9136170 18067 + protein coding gene uridine phosphorylase 1
Tssr3424 11 9118134 to 9118141 7 + TSS region transcription start site region 3424
Cpgi2578 11 9118352 to 9119440 1088 CpG island CpG island 2578
Tssr100325 11 9118536 to 9118556 20 + TSS region transcription start site region 100325
Tssr100326 11 9118571 to 9118593 22 + TSS region transcription start site region 100326
Tssr100327 11 9118619 to 9118634 15 + TSS region transcription start site region 100327
Tssr100328 11 9119223 to 9119230 7 + TSS region transcription start site region 100328
Tssr100329 11 9119279 to 9119296 17 + TSS region transcription start site region 100329
Tssr100330 11 9120056 to 9120064 8 + TSS region transcription start site region 100330
Tssr100331 11 9125114 to 9125143 29 + TSS region transcription start site region 100331
Tssr100332 11 9125157 to 9125170 13 + TSS region transcription start site region 100332
Tssr100333 11 9131624 to 9131631 7 + TSS region transcription start site region 100333
Tssr100334 11 9139300 to 9139301 1 + TSS region transcription start site region 100334
Gm11993 11 9149778 to 9150597 819 - pseudogene predicted gene 11993
Cpgi2579 11 9150380 to 9150674 294 CpG island CpG island 2579
Tssr100335 11 9191769 to 9191779 10 + TSS region transcription start site region 100335
Tssr100336 11 9191790 to 9191799 9 + TSS region transcription start site region 100336
Tssr100337 11 9191934 to 9191948 14 + TSS region transcription start site region 100337
Abca13 11 9191942 to 9684259 492317 + protein coding gene ATP-binding cassette, sub-family A (ABC1), member 13
Tssr100338 11 9193415 to 9193428 13 + TSS region transcription start site region 100338
Tssr100339 11 9255627 to 9255628 1 + TSS region transcription start site region 100339
Tssr3425 11 9598077 to 9598078 1 + TSS region transcription start site region 3425
Gm36954 11 9705261 to 9705623 362 - unclassified gene predicted gene, 36954
D11Mit259 11 9736728 to 9736842 114 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 259
Eif3s6-ps1 11 9737152 to 9737621 469 - pseudogene eukaryotic translation initiation factor 3, subunit 6, pseudogene 1