Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:90844421-93144527

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930405D11Rik 11 90804692 to 90895149 90457 + lincRNA gene RIKEN cDNA 4930405D11 gene
Gm11516 11 90859767 to 90861348 1581 - pseudogene predicted gene 11516
Tssr104131 11 90883321 to 90883325 4 + TSS region transcription start site region 104131
Gm46292 11 90969096 to 90973045 3949 - pseudogene predicted gene, 46292
Gm38950 11 91560593 to 91561807 1214 - lncRNA gene predicted gene, 38950
Kif2b 11 91575315 to 91577558 2243 - protein coding gene kinesin family member 2B
Cpgi3537 11 91576638 to 91576977 339 CpG island CpG island 3537
Tssr3639 11 91577503 to 91577512 9 - TSS region transcription start site region 3639
Tssr110102 11 91577513 to 91577574 61 - TSS region transcription start site region 110102
Tssr3640 11 91577586 to 91577590 4 - TSS region transcription start site region 3640
Gm11498 11 91830442 to 91831390 948 - pseudogene predicted gene 11498
D11Mit287 11 91994421 to 91994527 106 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 287
Gm22702 11 92024345 to 92024413 68 - miRNA gene predicted gene, 22702
Tssr110103 11 92047406 to 92047414 8 - TSS region transcription start site region 110103
Gm11500 11 92770034 to 92770973 939 - pseudogene predicted gene 11500
Gm11501 11 92792704 to 92793279 575 - pseudogene predicted gene 11501
Gm25113 11 92910297 to 92910439 142 + snoRNA gene predicted gene, 25113
Tssr104132 11 93014434 to 93014480 46 + TSS region transcription start site region 104132
D11Mit122 11 93048547 to 93048672 125 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 122
Gm2138 11 93096816 to 93099992 3176 unclassified non-coding RNA gene predicted gene 2138
Cpgi3538 11 93098004 to 93100219 2215 CpG island CpG island 3538
Tssr104133 11 93098037 to 93098056 19 + TSS region transcription start site region 104133
Car10 11 93098141 to 93601751 503610 + protein coding gene carbonic anhydrase 10
Tssr104134 11 93098357 to 93098397 40 + TSS region transcription start site region 104134
Tssr104135 11 93098405 to 93098437 32 + TSS region transcription start site region 104135
Tssr104136 11 93099220 to 93099230 10 + TSS region transcription start site region 104136
Tssr104137 11 93099240 to 93099249 9 + TSS region transcription start site region 104137
Tssr104138 11 93099284 to 93099331 47 + TSS region transcription start site region 104138
Tssr104139 11 93099665 to 93099676 11 + TSS region transcription start site region 104139
Tssr104140 11 93100189 to 93100201 12 + TSS region transcription start site region 104140
Heal26 11 112653728 to 93048547 -19605181 QTL wound healing/regeneration 26