MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:90423484-90654146

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lfibq23	11	89751423 to 90536535	785112		QTL	liver fibrosis QTL 23
Gm34850	11	90463383 to 90472880	9497	-	lncRNA gene	predicted gene, 34850
Stxbp4	11	90476492 to 90638084	161592	-	protein coding gene	syntaxin binding protein 4
Gm11511	11	90516777 to 90517316	539	-	pseudogene	predicted gene 11511
Gm11512	11	90538484 to 90539146	662	-	pseudogene	predicted gene 11512
Tssr104121	11	90548839 to 90548872	33	+	TSS region	transcription start site region 104121
Tssr110094	11	90549427 to 90549436	9	-	TSS region	transcription start site region 110094
Tssr110095	11	90549438 to 90549446	8	-	TSS region	transcription start site region 110095
Tssr110096	11	90554018 to 90554027	9	-	TSS region	transcription start site region 110096
Tssr104122	11	90586547 to 90586558	11	+	TSS region	transcription start site region 104122
Cpgi3535	11	90637662 to 90638874	1212		CpG island	CpG island 3535
Tssr110097	11	90638067 to 90638100	33	-	TSS region	transcription start site region 110097
Tssr104123	11	90638127 to 90638207	80	+	TSS region	transcription start site region 104123
Cox11	11	90638173 to 90644931	6758	+	protein coding gene	cytochrome c oxidase assembly protein 11, copper chaperone
Tssr104124	11	90638212 to 90638223	11	+	TSS region	transcription start site region 104124
Tssr104125	11	90638417 to 90638445	28	+	TSS region	transcription start site region 104125
Tssr104126	11	90639601 to 90639602	1	+	TSS region	transcription start site region 104126
Tom1l1	11	90645690 to 90687662	41972	-	protein coding gene	target of myb1-like 1 (chicken)