Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:9012152-10462621

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sun3 11 9016054 to 9048991 32937 - protein coding gene Sad1 and UNC84 domain containing 3
Lmr6 11 9026225 to 9026374 149 QTL leishmaniasis resistance 6
Skull15 11 9026225 to 9026374 149 QTL skull morphology 15
Tshp9 11 9026225 to 9026374 149 QTL tooth shape 9
D11Mit62 11 9026225 to 9026374 149 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 62
Tssr106852 11 9039579 to 9039584 5 - TSS region transcription start site region 106852
Tssr106853 11 9039585 to 9039601 16 - TSS region transcription start site region 106853
Tssr106854 11 9039618 to 9039625 7 - TSS region transcription start site region 106854
Cpgi2577 11 9048390 to 9049190 800 CpG island CpG island 2577
Tssr106855 11 9048473 to 9048489 16 - TSS region transcription start site region 106855
Tssr106856 11 9048493 to 9048511 18 - TSS region transcription start site region 106856
Tssr106857 11 9048514 to 9048521 7 - TSS region transcription start site region 106857
Tssr100316 11 9048575 to 9048630 55 + TSS region transcription start site region 100316
Gm11992 11 9048592 to 9069354 20762 + protein coding gene predicted gene 11992
Tssr100317 11 9048698 to 9048711 13 + TSS region transcription start site region 100317
Tssr100318 11 9048829 to 9048839 10 + TSS region transcription start site region 100318
Tssr3422 11 9049033 to 9049043 10 + TSS region transcription start site region 3422
Tssr100319 11 9049047 to 9049061 14 + TSS region transcription start site region 100319
Tssr100320 11 9049069 to 9049082 13 + TSS region transcription start site region 100320
Tssr100321 11 9049098 to 9049110 12 + TSS region transcription start site region 100321
Tssr100322 11 9117952 to 9117990 38 + TSS region transcription start site region 100322
Tssr100323 11 9117998 to 9118017 19 + TSS region transcription start site region 100323
Tssr100324 11 9118070 to 9118091 21 + TSS region transcription start site region 100324
Tssr3423 11 9118098 to 9118133 35 + TSS region transcription start site region 3423
Upp1 11 9118103 to 9136170 18067 + protein coding gene uridine phosphorylase 1
Tssr3424 11 9118134 to 9118141 7 + TSS region transcription start site region 3424
Cpgi2578 11 9118352 to 9119440 1088 CpG island CpG island 2578
Tssr100325 11 9118536 to 9118556 20 + TSS region transcription start site region 100325
Tssr100326 11 9118571 to 9118593 22 + TSS region transcription start site region 100326
Tssr100327 11 9118619 to 9118634 15 + TSS region transcription start site region 100327
Tssr100328 11 9119223 to 9119230 7 + TSS region transcription start site region 100328
Tssr100329 11 9119279 to 9119296 17 + TSS region transcription start site region 100329
Tssr100330 11 9120056 to 9120064 8 + TSS region transcription start site region 100330
Tssr100331 11 9125114 to 9125143 29 + TSS region transcription start site region 100331
Tssr100332 11 9125157 to 9125170 13 + TSS region transcription start site region 100332
Tssr100333 11 9131624 to 9131631 7 + TSS region transcription start site region 100333
Tssr100334 11 9139300 to 9139301 1 + TSS region transcription start site region 100334
Gm11993 11 9149778 to 9150597 819 - pseudogene predicted gene 11993
Cpgi2579 11 9150380 to 9150674 294 CpG island CpG island 2579
Tssr100335 11 9191769 to 9191779 10 + TSS region transcription start site region 100335
Tssr100336 11 9191790 to 9191799 9 + TSS region transcription start site region 100336
Tssr100337 11 9191934 to 9191948 14 + TSS region transcription start site region 100337
Abca13 11 9191942 to 9684259 492317 + protein coding gene ATP-binding cassette, sub-family A (ABC1), member 13
Tssr100338 11 9193415 to 9193428 13 + TSS region transcription start site region 100338
Tssr100339 11 9255627 to 9255628 1 + TSS region transcription start site region 100339
Tssr3425 11 9598077 to 9598078 1 + TSS region transcription start site region 3425
Gm36954 11 9705261 to 9705623 362 - unclassified gene predicted gene, 36954
D11Mit259 11 9736728 to 9736842 114 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 259
Eif3s6-ps1 11 9737152 to 9737621 469 - pseudogene eukaryotic translation initiation factor 3, subunit 6, pseudogene 1
Tssr106858 11 9873737 to 9873754 17 - TSS region transcription start site region 106858
Tssr106859 11 9873808 to 9873816 8 - TSS region transcription start site region 106859
Gm11996 11 10239337 to 10240251 914 + pseudogene predicted gene 11996
Tssr100340 11 10292213 to 10292215 2 + TSS region transcription start site region 100340
Gm20551 11 10374770 to 10375082 312 - pseudogene predicted gene, 20551
Gm11997 11 10376770 to 10377082 312 - pseudogene predicted gene 11997
Gm46255 11 10438451 to 10441867 3416 - protein coding gene predicted gene, 46255