Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:90104456-90423589

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34726 11 90043364 to 90130395 87031 - lncRNA gene predicted gene, 34726
Tssr110080 11 90121810 to 90121815 5 - TSS region transcription start site region 110080
Tssr110081 11 90130235 to 90130258 23 - TSS region transcription start site region 110081
Tssr110082 11 90130266 to 90130277 11 - TSS region transcription start site region 110082
Gm11494 11 90134842 to 90143624 8782 - lincRNA gene predicted gene 11494
n-R5s72 11 90185009 to 90185127 118 - rRNA gene nuclear encoded rRNA 5S 72
Tssr104108 11 90187658 to 90187690 32 + TSS region transcription start site region 104108
Gm45716 11 90187683 to 90251255 63572 + protein coding gene predicted gene 45716
Tssr104109 11 90187701 to 90187707 6 + TSS region transcription start site region 104109
Gm45883 11 90188108 to 90267581 79473 + unclassified non-coding RNA gene predicted gene 45883
Gm42089 11 90195067 to 90225568 30501 - lncRNA gene predicted gene, 42089
Cpgi3531 11 90249027 to 90250120 1093 CpG island CpG island 3531
Tssr104110 11 90249426 to 90249448 22 + TSS region transcription start site region 104110
Mmd 11 90249456 to 90278589 29133 + protein coding gene monocyte to macrophage differentiation-associated
Tssr104111 11 90249469 to 90249482 13 + TSS region transcription start site region 104111
Tssr104112 11 90249487 to 90249503 16 + TSS region transcription start site region 104112
Tssr104113 11 90249513 to 90249532 19 + TSS region transcription start site region 104113
Tssr104114 11 90249565 to 90249574 9 + TSS region transcription start site region 104114
Tssr104115 11 90249580 to 90249589 9 + TSS region transcription start site region 104115
D11Mit286 11 90252959 to 90253082 123 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 286
D11Dcr16 11 90252981 to 90253081 100 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 16
Tssr104116 11 90255140 to 90255159 19 + TSS region transcription start site region 104116
Tssr104117 11 90257361 to 90257378 17 + TSS region transcription start site region 104117
Tssr104118 11 90257395 to 90257407 12 + TSS region transcription start site region 104118
Tssr104119 11 90259403 to 90259435 32 + TSS region transcription start site region 104119
D11Mit357 11 90263212 to 90263360 148 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 357
Tssr104120 11 90276929 to 90276969 40 + TSS region transcription start site region 104120
Hlf 11 90336536 to 90390895 54359 - protein coding gene hepatic leukemia factor
2900006B11Rik 11 90356561 to 90357829 1268 unclassified gene RIKEN cDNA 2900006B11 gene
Tssr110083 11 90382723 to 90382731 8 - TSS region transcription start site region 110083
Cpgi3532 11 90387621 to 90388022 401 CpG island CpG island 3532
Tssr110084 11 90388207 to 90388237 30 - TSS region transcription start site region 110084
Tssr110085 11 90388522 to 90388535 13 - TSS region transcription start site region 110085
Tssr110086 11 90389580 to 90389602 22 - TSS region transcription start site region 110086
Cpgi3533 11 90389581 to 90391171 1590 CpG island CpG island 3533
Tssr110087 11 90389630 to 90389668 38 - TSS region transcription start site region 110087
Tssr110088 11 90389685 to 90389699 14 - TSS region transcription start site region 110088
Tssr110089 11 90390538 to 90390541 3 - TSS region transcription start site region 110089
Tssr110090 11 90390646 to 90390658 12 - TSS region transcription start site region 110090
Tssr110091 11 90390757 to 90390779 22 - TSS region transcription start site region 110091
Tssr110092 11 90390794 to 90390820 26 - TSS region transcription start site region 110092
Tssr110093 11 90390909 to 90390926 17 - TSS region transcription start site region 110093
Cpgi3534 11 90417791 to 90418384 593 CpG island CpG island 3534