Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:8929618-9149625

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pkd1l1 11 8826708 to 8973266 146558 - protein coding gene polycystic kidney disease 1 like 1
Hus1 11 8993137 to 9011191 18054 - protein coding gene HUS1 checkpoint clamp component
Tssr100315 11 9010675 to 9010709 34 + TSS region transcription start site region 100315
Cpgi2576 11 9010829 to 9011330 501 CpG island CpG island 2576
Tssr106851 11 9011111 to 9011164 53 - TSS region transcription start site region 106851
Sun3 11 9016054 to 9048991 32937 - protein coding gene Sad1 and UNC84 domain containing 3
Skull15 11 9026225 to 9026374 149 QTL skull morphology 15
D11Mit62 11 9026225 to 9026374 149 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 62
Lmr6 11 9026225 to 9026374 149 QTL leishmaniasis resistance 6
Tshp9 11 9026225 to 9026374 149 QTL tooth shape 9
Tssr106852 11 9039579 to 9039584 5 - TSS region transcription start site region 106852
Tssr106853 11 9039585 to 9039601 16 - TSS region transcription start site region 106853
Tssr106854 11 9039618 to 9039625 7 - TSS region transcription start site region 106854
Cpgi2577 11 9048390 to 9049190 800 CpG island CpG island 2577
Tssr106855 11 9048473 to 9048489 16 - TSS region transcription start site region 106855
Tssr106856 11 9048493 to 9048511 18 - TSS region transcription start site region 106856
Tssr106857 11 9048514 to 9048521 7 - TSS region transcription start site region 106857
Tssr100316 11 9048575 to 9048630 55 + TSS region transcription start site region 100316
Gm11992 11 9048592 to 9069354 20762 + protein coding gene predicted gene 11992
Tssr100317 11 9048698 to 9048711 13 + TSS region transcription start site region 100317
Tssr100318 11 9048829 to 9048839 10 + TSS region transcription start site region 100318
Tssr3422 11 9049033 to 9049043 10 + TSS region transcription start site region 3422
Tssr100319 11 9049047 to 9049061 14 + TSS region transcription start site region 100319
Tssr100320 11 9049069 to 9049082 13 + TSS region transcription start site region 100320
Tssr100321 11 9049098 to 9049110 12 + TSS region transcription start site region 100321
Tssr100322 11 9117952 to 9117990 38 + TSS region transcription start site region 100322
Tssr100323 11 9117998 to 9118017 19 + TSS region transcription start site region 100323
Tssr100324 11 9118070 to 9118091 21 + TSS region transcription start site region 100324
Tssr3423 11 9118098 to 9118133 35 + TSS region transcription start site region 3423
Upp1 11 9118103 to 9136170 18067 + protein coding gene uridine phosphorylase 1
Tssr3424 11 9118134 to 9118141 7 + TSS region transcription start site region 3424
Cpgi2578 11 9118352 to 9119440 1088 CpG island CpG island 2578
Tssr100325 11 9118536 to 9118556 20 + TSS region transcription start site region 100325
Tssr100326 11 9118571 to 9118593 22 + TSS region transcription start site region 100326
Tssr100327 11 9118619 to 9118634 15 + TSS region transcription start site region 100327
Tssr100328 11 9119223 to 9119230 7 + TSS region transcription start site region 100328
Tssr100329 11 9119279 to 9119296 17 + TSS region transcription start site region 100329
Tssr100330 11 9120056 to 9120064 8 + TSS region transcription start site region 100330
Tssr100331 11 9125114 to 9125143 29 + TSS region transcription start site region 100331
Tssr100332 11 9125157 to 9125170 13 + TSS region transcription start site region 100332
Tssr100333 11 9131624 to 9131631 7 + TSS region transcription start site region 100333
Tssr100334 11 9139300 to 9139301 1 + TSS region transcription start site region 100334