Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:88786476-88896491

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pid3 11 61795994 to 88808902 27012908 QTL prion incubation determinant 3
Abbp4 11 88808762 to 99190771 10382009 QTL A/J and C57BL/6 blood pressure 4
D11Mit212 11 88808762 to 88808902 140 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 212
Tssr110037 11 88827272 to 88827314 42 - TSS region transcription start site region 110037
Akap1 11 88830792 to 88864586 33794 - protein coding gene A kinase (PRKA) anchor protein 1
Tssr110038 11 88841433 to 88841475 42 - TSS region transcription start site region 110038
Tssr110039 11 88841476 to 88841491 15 - TSS region transcription start site region 110039
Tssr110040 11 88844434 to 88844454 20 - TSS region transcription start site region 110040
Tssr110041 11 88851462 to 88851522 60 - TSS region transcription start site region 110041
4930556N13Rik 11 88851604 to 88881395 29791 + antisense lncRNA gene RIKEN cDNA 4930556N13 gene
Tssr104052 11 88851620 to 88851623 3 + TSS region transcription start site region 104052
Tssr104053 11 88851641 to 88851652 11 + TSS region transcription start site region 104053
Cpgi3520 11 88863245 to 88865045 1800 CpG island CpG island 3520
Tssr110042 11 88863801 to 88863810 9 - TSS region transcription start site region 110042
Tssr110043 11 88863821 to 88863834 13 - TSS region transcription start site region 110043
Tssr110044 11 88864509 to 88864527 18 - TSS region transcription start site region 110044
Tssr110045 11 88864534 to 88864591 57 - TSS region transcription start site region 110045
Tssr104054 11 88864771 to 88864807 36 + TSS region transcription start site region 104054
Tssr110046 11 88877088 to 88877091 3 - TSS region transcription start site region 110046
Cpgi3521 11 88878245 to 88878487 242 CpG island CpG island 3521