Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:88718015-88838252

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pid3 11 61795994 to 88808902 27012908 QTL prion incubation determinant 3
Msi2 11 88339382 to 88718267 378885 - protein coding gene musashi RNA-binding protein 2
Cpgi3518 11 88717700 to 88719130 1430 CpG island CpG island 3518
Tssr110031 11 88718048 to 88718059 11 - TSS region transcription start site region 110031
Tssr110032 11 88718078 to 88718104 26 - TSS region transcription start site region 110032
Tssr110033 11 88718136 to 88718161 25 - TSS region transcription start site region 110033
Tssr110034 11 88718165 to 88718196 31 - TSS region transcription start site region 110034
Tssr110035 11 88718223 to 88718294 71 - TSS region transcription start site region 110035
Tssr110036 11 88718296 to 88718310 14 - TSS region transcription start site region 110036
Tssr104050 11 88718442 to 88718504 62 + TSS region transcription start site region 104050
C030037D09Rik 11 88718643 to 88728572 9929 + lincRNA gene RIKEN cDNA C030037D09 gene
Tssr104051 11 88728061 to 88728076 15 + TSS region transcription start site region 104051
Gm11493 11 88741011 to 88743369 2358 - lincRNA gene predicted gene 11493
Cpgi3519 11 88778015 to 88778252 237 CpG island CpG island 3519
Abbp4 11 88808762 to 99190771 10382009 QTL A/J and C57BL/6 blood pressure 4
D11Mit212 11 88808762 to 88808902 140 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 212
Tssr110037 11 88827272 to 88827314 42 - TSS region transcription start site region 110037
Akap1 11 88830792 to 88864586 33794 - protein coding gene A kinase (PRKA) anchor protein 1