MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:8809024-9040221

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pkd1l1	11	8826708 to 8973266	146558	-	protein coding gene	polycystic kidney disease 1 like 1
Gm40815	11	8884173 to 8885303	1130	+	pseudogene	predicted gene, 40815
Gm11991	11	8884223 to 8885296	1073	-	pseudogene	predicted gene 11991
Tssr106850	11	8903717 to 8903727	10	-	TSS region	transcription start site region 106850
D11Mit226	11	8904955 to 8905093	138		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 226
Gm40814	11	8921301 to 8927994	6693	+	protein coding gene	predicted gene, 40814
Gm46271	11	8924024 to 8925221	1197	+	lncRNA gene	predicted gene, 46271
Hus1	11	8993137 to 9011191	18054	-	protein coding gene	HUS1 checkpoint clamp component
Tssr100315	11	9010675 to 9010709	34	+	TSS region	transcription start site region 100315
Cpgi2576	11	9010829 to 9011330	501		CpG island	CpG island 2576
Tssr106851	11	9011111 to 9011164	53	-	TSS region	transcription start site region 106851
Sun3	11	9016054 to 9048991	32937	-	protein coding gene	Sad1 and UNC84 domain containing 3
D11Mit62	11	9026225 to 9026374	149		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 62
Skull15	11	9026225 to 9026374	149		QTL	skull morphology 15
Tshp9	11	9026225 to 9026374	149		QTL	tooth shape 9
Lmr6	11	9026225 to 9026374	149		QTL	leishmaniasis resistance 6
Tssr106852	11	9039579 to 9039584	5	-	TSS region	transcription start site region 106852
Tssr106853	11	9039585 to 9039601	16	-	TSS region	transcription start site region 106853
Tssr106854	11	9039618 to 9039625	7	-	TSS region	transcription start site region 106854