Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:87798335-87858348

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ity2 11 58617204 to 87804412 29187208 QTL immunity to S. typhimurium 2
Mpo 11 87793784 to 87804412 10628 + protein coding gene myeloperoxidase
Gm11505 11 87795784 to 87801144 5360 - antisense lncRNA gene predicted gene 11505
Tssr104006 11 87799889 to 87799900 11 + TSS region transcription start site region 104006
Tssr3634 11 87799906 to 87799921 15 - TSS region transcription start site region 3634
Tssr104007 11 87799972 to 87799984 12 + TSS region transcription start site region 104007
Nilac2 11 87800372 to 87800540 168 QTL nicotine induced locomotor activity 2
Rafar 11 87800372 to 87800540 168 QTL retinoic acid induced forelimb autopod reduction
Sle13 11 87800372 to 87800540 168 QTL systematic lupus erythematosus susceptibility 13
D11Mit39 11 87800372 to 87800540 168 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 39
Pcyts3 11 87800372 to 87800540 168 QTL plasmacytoma susceptibility 3
Tssr3635 11 87801017 to 87801023 6 + TSS region transcription start site region 3635
Tssr104008 11 87801041 to 87801051 10 + TSS region transcription start site region 104008
Tssr109981 11 87801092 to 87801109 17 - TSS region transcription start site region 109981
Tssr104009 11 87801216 to 87801262 46 + TSS region transcription start site region 104009
Cpgi3501 11 87802523 to 87802845 322 CpG island CpG island 3501
Lpo 11 87806428 to 87826119 19691 - protein coding gene lactoperoxidase
Tssr109982 11 87814322 to 87814335 13 - TSS region transcription start site region 109982
Cpgi3502 11 87817037 to 87817528 491 CpG island CpG island 3502
Tssr109983 11 87825772 to 87825789 17 - TSS region transcription start site region 109983
Tssr109984 11 87825938 to 87825941 3 - TSS region transcription start site region 109984
Tssr109985 11 87826023 to 87826039 16 - TSS region transcription start site region 109985
Tssr109986 11 87828309 to 87828324 15 - TSS region transcription start site region 109986
Tssr109987 11 87828335 to 87828348 13 - TSS region transcription start site region 109987
Cpgi3503 11 87852975 to 87853638 663 CpG island CpG island 3503
Tssr104010 11 87853207 to 87853249 42 + TSS region transcription start site region 104010
Mks1 11 87853215 to 87863803 10588 + protein coding gene Meckel syndrome, type 1
Motr1 11 103383289 to 87800372 -15582917 QTL modifier of tubby retinal degeneration 1