Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:87794972-87804984

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ity2 11 58617204 to 87804412 29187208 QTL immunity to S. typhimurium 2
Gm34064 11 87783349 to 87795187 11838 - lncRNA gene predicted gene, 34064
Mpo 11 87793784 to 87804412 10628 + protein coding gene myeloperoxidase
Tssr103990 11 87795213 to 87795227 14 + TSS region transcription start site region 103990
Tssr3632 11 87795262 to 87795268 6 + TSS region transcription start site region 3632
Tssr103991 11 87795286 to 87795300 14 + TSS region transcription start site region 103991
Tssr103992 11 87795307 to 87795318 11 + TSS region transcription start site region 103992
Tssr103993 11 87795783 to 87795792 9 + TSS region transcription start site region 103993
Gm11505 11 87795784 to 87801144 5360 - antisense lncRNA gene predicted gene 11505
Tssr103994 11 87795855 to 87795874 19 + TSS region transcription start site region 103994
Tssr103995 11 87796031 to 87796043 12 + TSS region transcription start site region 103995
Tssr103996 11 87796083 to 87796093 10 + TSS region transcription start site region 103996
Tssr103997 11 87796253 to 87796263 10 + TSS region transcription start site region 103997
Tssr3633 11 87796313 to 87796339 26 + TSS region transcription start site region 3633
Tssr103998 11 87796360 to 87796408 48 + TSS region transcription start site region 103998
Tssr109976 11 87796421 to 87796434 13 - TSS region transcription start site region 109976
Tssr103999 11 87797316 to 87797331 15 + TSS region transcription start site region 103999
Tssr109977 11 87797345 to 87797370 25 - TSS region transcription start site region 109977
Tssr109978 11 87797373 to 87797380 7 - TSS region transcription start site region 109978
Tssr109979 11 87797425 to 87797447 22 - TSS region transcription start site region 109979
Tssr104000 11 87797428 to 87797445 17 + TSS region transcription start site region 104000
Tssr104001 11 87797458 to 87797471 13 + TSS region transcription start site region 104001
Tssr104002 11 87797484 to 87797493 9 + TSS region transcription start site region 104002
Tssr104003 11 87797557 to 87797568 11 + TSS region transcription start site region 104003
Tssr104004 11 87797583 to 87797590 7 + TSS region transcription start site region 104004
Tssr104005 11 87797607 to 87797617 10 + TSS region transcription start site region 104005
Tssr109980 11 87797613 to 87797622 9 - TSS region transcription start site region 109980
Tssr104006 11 87799889 to 87799900 11 + TSS region transcription start site region 104006
Tssr3634 11 87799906 to 87799921 15 - TSS region transcription start site region 3634
Tssr104007 11 87799972 to 87799984 12 + TSS region transcription start site region 104007
Pcyts3 11 87800372 to 87800540 168 QTL plasmacytoma susceptibility 3
D11Mit39 11 87800372 to 87800540 168 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 39
Nilac2 11 87800372 to 87800540 168 QTL nicotine induced locomotor activity 2
Rafar 11 87800372 to 87800540 168 QTL retinoic acid induced forelimb autopod reduction
Sle13 11 87800372 to 87800540 168 QTL systematic lupus erythematosus susceptibility 13
Tssr3635 11 87801017 to 87801023 6 + TSS region transcription start site region 3635
Tssr104008 11 87801041 to 87801051 10 + TSS region transcription start site region 104008
Tssr109981 11 87801092 to 87801109 17 - TSS region transcription start site region 109981
Tssr104009 11 87801216 to 87801262 46 + TSS region transcription start site region 104009
Cpgi3501 11 87802523 to 87802845 322 CpG island CpG island 3501
Motr1 11 103383289 to 87800372 -15582917 QTL modifier of tubby retinal degeneration 1