Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:87751804-87762353

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr103963 11 87751792 to 87751810 18 + TSS region transcription start site region 103963
Tssr103964 11 87751819 to 87751843 24 + TSS region transcription start site region 103964
Tssr103965 11 87751908 to 87751924 16 + TSS region transcription start site region 103965
Tssr103966 11 87754860 to 87754871 11 + TSS region transcription start site region 103966
Tssr103967 11 87755567 to 87755588 21 + TSS region transcription start site region 103967
Mir142hg 11 87755577 to 87757270 1693 + lincRNA gene Mir142 host gene (non-protein coding)
Tssr103968 11 87755889 to 87755901 12 + TSS region transcription start site region 103968
Tssr103969 11 87756631 to 87756635 4 + TSS region transcription start site region 103969
Tssr103970 11 87756789 to 87756826 37 + TSS region transcription start site region 103970
Cpgi3497 11 87756804 to 87757353 549 CpG island CpG island 3497
Mir142b 11 87756841 to 87756955 114 - miRNA gene microRNA 142b
Mir142 11 87756864 to 87756927 63 + miRNA gene microRNA 142
Tssr103971 11 87756925 to 87756929 4 + TSS region transcription start site region 103971
Tssr109975 11 87757265 to 87757269 4 - TSS region transcription start site region 109975
Tssr103972 11 87760533 to 87760551 18 + TSS region transcription start site region 103972
Tspoap1 11 87760541 to 87785928 25387 + protein coding gene TSPO associated protein 1
Cpgi3498 11 87760702 to 87760864 162 CpG island CpG island 3498
Tssr103973 11 87760898 to 87760903 5 + TSS region transcription start site region 103973
Tssr103974 11 87761062 to 87761067 5 + TSS region transcription start site region 103974
Tssr103975 11 87762048 to 87762069 21 + TSS region transcription start site region 103975