Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:87607621-87707626

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mtmr4	11	87592162 to 87616302	24140	+	protein coding gene	myotubularin related protein 4
Cpgi3494	11	87616818 to 87618007	1189		CpG island	CpG island 3494
Tssr103947	11	87617151 to 87617164	13	+	TSS region	transcription start site region 103947
Hsf5	11	87617164 to 87659542	42378	+	protein coding gene	heat shock transcription factor family member 5
Tssr103948	11	87617176 to 87617200	24	+	TSS region	transcription start site region 103948
Tssr103949	11	87617211 to 87617222	11	+	TSS region	transcription start site region 103949
Tssr103950	11	87617226 to 87617247	21	+	TSS region	transcription start site region 103950
Tssr103951	11	87617253 to 87617258	5	+	TSS region	transcription start site region 103951
Cpgi3495	11	87639116 to 87639552	436		CpG island	CpG island 3495
Tssr103952	11	87657621 to 87657626	5	+	TSS region	transcription start site region 103952
Tssr103953	11	87662618 to 87662680	62	+	TSS region	transcription start site region 103953
Tssr103954	11	87662685 to 87662699	14	+	TSS region	transcription start site region 103954
Tssr3628	11	87662716 to 87662727	11	+	TSS region	transcription start site region 3628
Rnf43	11	87663087 to 87735539	72452	+	protein coding gene	ring finger protein 43
Tssr3629	11	87687730 to 87687733	3	+	TSS region	transcription start site region 3629
Gm25968	11	87694482 to 87694581	99	-	snRNA gene	predicted gene, 25968
Tssr103955	11	87699895 to 87699914	19	+	TSS region	transcription start site region 103955
1110028F11Rik	11	87701396 to 87705331	3935	+	sense intronic lncRNA gene	RIKEN cDNA 1110028F11 gene