Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:87577164-87699542

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sept4 11 87568903 to 87590539 21636 + protein coding gene septin 4
Cpgi3491 11 87578346 to 87578874 528 CpG island CpG island 3491
Tssr103932 11 87578384 to 87578470 86 + TSS region transcription start site region 103932
Tssr103933 11 87578477 to 87578492 15 + TSS region transcription start site region 103933
Tssr103934 11 87578498 to 87578500 2 + TSS region transcription start site region 103934
Tssr103935 11 87581045 to 87581067 22 + TSS region transcription start site region 103935
Tssr103936 11 87581106 to 87581125 19 + TSS region transcription start site region 103936
Tssr103937 11 87581146 to 87581153 7 + TSS region transcription start site region 103937
Tssr103938 11 87582201 to 87582215 14 + TSS region transcription start site region 103938
Tssr103939 11 87582233 to 87582244 11 + TSS region transcription start site region 103939
Tssr103940 11 87583937 to 87583951 14 + TSS region transcription start site region 103940
Cpgi3492 11 87591112 to 87592595 1483 CpG island CpG island 3492
Tssr109965 11 87591556 to 87591560 4 - TSS region transcription start site region 109965
Tssr109966 11 87591712 to 87591723 11 - TSS region transcription start site region 109966
Tssr109967 11 87591751 to 87591773 22 - TSS region transcription start site region 109967
Tssr103941 11 87592145 to 87592229 84 + TSS region transcription start site region 103941
Mtmr4 11 87592162 to 87616302 24140 + protein coding gene myotubularin related protein 4
Tssr103942 11 87592641 to 87592672 31 + TSS region transcription start site region 103942
Tssr103943 11 87592944 to 87593006 62 + TSS region transcription start site region 103943
Tssr103944 11 87593589 to 87593593 4 + TSS region transcription start site region 103944
Cpgi3493 11 87595306 to 87596108 802 CpG island CpG island 3493
Tssr103945 11 87595646 to 87595659 13 + TSS region transcription start site region 103945
Tssr103946 11 87595664 to 87595719 55 + TSS region transcription start site region 103946
Cpgi3494 11 87616818 to 87618007 1189 CpG island CpG island 3494
Tssr103947 11 87617151 to 87617164 13 + TSS region transcription start site region 103947
Hsf5 11 87617164 to 87659542 42378 + protein coding gene heat shock transcription factor family member 5
Tssr103948 11 87617176 to 87617200 24 + TSS region transcription start site region 103948
Tssr103949 11 87617211 to 87617222 11 + TSS region transcription start site region 103949
Tssr103950 11 87617226 to 87617247 21 + TSS region transcription start site region 103950
Tssr103951 11 87617253 to 87617258 5 + TSS region transcription start site region 103951
Cpgi3495 11 87639116 to 87639552 436 CpG island CpG island 3495
Tssr103952 11 87657621 to 87657626 5 + TSS region transcription start site region 103952
Tssr103953 11 87662618 to 87662680 62 + TSS region transcription start site region 103953
Tssr103954 11 87662685 to 87662699 14 + TSS region transcription start site region 103954
Tssr3628 11 87662716 to 87662727 11 + TSS region transcription start site region 3628
Rnf43 11 87663087 to 87735539 72452 + protein coding gene ring finger protein 43
Tssr3629 11 87687730 to 87687733 3 + TSS region transcription start site region 3629
Gm25968 11 87694482 to 87694581 99 - snRNA gene predicted gene, 25968