Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:87456768-87586892

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tex14 11 87405065 to 87555823 150758 + protein coding gene testis expressed gene 14
D11Mit56 11 87461242 to 87461424 182 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 56
Cpgi3489 11 87461712 to 87462004 292 CpG island CpG island 3489
Rnu3b4 11 87462286 to 87462503 217 + snRNA gene U3B small nuclear RNA 4
Gm11489 11 87467679 to 87469058 1379 + pseudogene predicted gene 11489
Cpgi3490 11 87470822 to 87471074 252 CpG island CpG island 3490
Rnu3b2 11 87471368 to 87471582 214 + snRNA gene U3B small nuclear RNA 2
Tssr103926 11 87471592 to 87471603 11 + TSS region transcription start site region 103926
Tssr103927 11 87471666 to 87471674 8 + TSS region transcription start site region 103927
D11Mit158 11 87521763 to 87521912 149 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 158
D11Mit323 11 87521768 to 87521892 124 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 323
Gm34000 11 87547859 to 87566624 18765 - lncRNA gene predicted gene, 34000
Tssr109964 11 87566582 to 87566602 20 - TSS region transcription start site region 109964
Gm11492 11 87566653 to 87569250 2597 + protein coding gene predicted gene 11492
Tssr103928 11 87566656 to 87566661 5 + TSS region transcription start site region 103928
Tssr103929 11 87566670 to 87566673 3 + TSS region transcription start site region 103929
Tssr103930 11 87566680 to 87566710 30 + TSS region transcription start site region 103930
Tssr103931 11 87566718 to 87566732 14 + TSS region transcription start site region 103931
Sept4 11 87568903 to 87590539 21636 + protein coding gene septin 4
Cpgi3491 11 87578346 to 87578874 528 CpG island CpG island 3491
Tssr103932 11 87578384 to 87578470 86 + TSS region transcription start site region 103932
Tssr103933 11 87578477 to 87578492 15 + TSS region transcription start site region 103933
Tssr103934 11 87578498 to 87578500 2 + TSS region transcription start site region 103934
Tssr103935 11 87581045 to 87581067 22 + TSS region transcription start site region 103935
Tssr103936 11 87581106 to 87581125 19 + TSS region transcription start site region 103936
Tssr103937 11 87581146 to 87581153 7 + TSS region transcription start site region 103937
Tssr103938 11 87582201 to 87582215 14 + TSS region transcription start site region 103938
Tssr103939 11 87582233 to 87582244 11 + TSS region transcription start site region 103939
Tssr103940 11 87583937 to 87583951 14 + TSS region transcription start site region 103940