MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:87266640-87396647

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ppm1e	11	87226906 to 87358994	132088	-	protein coding gene	protein phosphatase 1E (PP2C domain containing)
Tssr109952	11	87281196 to 87281200	4	-	TSS region	transcription start site region 109952
Tssr109953	11	87293912 to 87293937	25	-	TSS region	transcription start site region 109953
Tssr109954	11	87294047 to 87294061	14	-	TSS region	transcription start site region 109954
Gm11490	11	87304673 to 87304944	271	+	pseudogene	predicted gene 11490
Gm22883	11	87318694 to 87318799	105	-	snRNA gene	predicted gene, 22883
Tssr109955	11	87320400 to 87320404	4	-	TSS region	transcription start site region 109955
Tssr109956	11	87325061 to 87325073	12	-	TSS region	transcription start site region 109956
Tssr103920	11	87331612 to 87331631	19	+	TSS region	transcription start site region 103920
Tssr103921	11	87331640 to 87331647	7	+	TSS region	transcription start site region 103921
5830426K05Rik	11	87340723 to 87343849	3126		unclassified gene	RIKEN cDNA 5830426K05 gene
Tssr109957	11	87342873 to 87342881	8	-	TSS region	transcription start site region 109957
Gm33937	11	87357523 to 87361744	4221	+	lncRNA gene	predicted gene, 33937
Cpgi3485	11	87358030 to 87359344	1314		CpG island	CpG island 3485
Tssr109958	11	87358907 to 87358944	37	-	TSS region	transcription start site region 109958
Tssr109959	11	87359011 to 87359081	70	-	TSS region	transcription start site region 109959
Tssr109960	11	87359086 to 87359093	7	-	TSS region	transcription start site region 109960
Rad51c	11	87377607 to 87404954	27347	-	protein coding gene	RAD51 paralog C