Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:87084153-87113708

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smg8 11 87077732 to 87086774 9042 - protein coding gene smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)
Cpgi3482 11 87086232 to 87086959 727 CpG island CpG island 3482
Tssr109944 11 87086732 to 87086743 11 - TSS region transcription start site region 109944
Tssr109945 11 87086752 to 87086781 29 - TSS region transcription start site region 109945
Prr11 11 87089153 to 87108708 19555 - protein coding gene proline rich 11
Tssr109946 11 87108656 to 87108719 63 - TSS region transcription start site region 109946
Cpgi3483 11 87108715 to 87110202 1487 CpG island CpG island 3483
Tssr109947 11 87108736 to 87108759 23 - TSS region transcription start site region 109947
Tssr109948 11 87108766 to 87108783 17 - TSS region transcription start site region 109948
Tssr103905 11 87109181 to 87109195 14 + TSS region transcription start site region 103905
Tssr103906 11 87109221 to 87109239 18 + TSS region transcription start site region 103906
Tssr103907 11 87109252 to 87109274 22 + TSS region transcription start site region 103907
Ska2 11 87109261 to 87122974 13713 + protein coding gene spindle and kinetochore associated complex subunit 2
Tssr103908 11 87109560 to 87109583 23 + TSS region transcription start site region 103908
Mir301 11 87113004 to 87113089 85 + miRNA gene microRNA 301
Tssr103909 11 87113078 to 87113080 2 + TSS region transcription start site region 103909