Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:87005845-87085860

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr103903	11	87015984 to 87015989	5	+	TSS region	transcription start site region 103903
Tssr109936	11	87025404 to 87025425	21	-	TSS region	transcription start site region 109936
Tssr103904	11	87025653 to 87025667	14	+	TSS region	transcription start site region 103904
Tssr109937	11	87026642 to 87026671	29	-	TSS region	transcription start site region 109937
Gdpd1	11	87033867 to 87074062	40195	-	protein coding gene	glycerophosphodiester phosphodiesterase domain containing 1
Tssr109938	11	87034408 to 87034411	3	-	TSS region	transcription start site region 109938
Tssr109939	11	87045845 to 87045860	15	-	TSS region	transcription start site region 109939
Tssr109940	11	87045911 to 87045931	20	-	TSS region	transcription start site region 109940
D11Dcr15	11	87060819 to 87060957	138		DNA segment	DNA Segment, Chr 11, Derry C. Roopenian 15
D11Mit325	11	87060826 to 87060949	123		DNA segment	DNA Segment, Chr 11, Massachusetts Institute of Technology 325
Cpgi3481	11	87073356 to 87074464	1108		CpG island	CpG island 3481
Tssr109941	11	87074055 to 87074071	16	-	TSS region	transcription start site region 109941
Tssr109942	11	87074073 to 87074116	43	-	TSS region	transcription start site region 109942
Tssr109943	11	87074120 to 87074131	11	-	TSS region	transcription start site region 109943
Gm11479	11	87074257 to 87074958	701	-	lincRNA gene	predicted gene 11479
Smg8	11	87077732 to 87086774	9042	-	protein coding gene	smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)
Gm9378	11	87078787 to 87079257	470	+	pseudogene	predicted gene 9378