Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:86757541-86857553

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cltc 11 86694610 to 86757742 63132 - protein coding gene clathrin, heavy polypeptide (Hc)
Cpgi3477 11 86756846 to 86758311 1465 CpG island CpG island 3477
Tssr109921 11 86757483 to 86757572 89 - TSS region transcription start site region 109921
Gm42085 11 86757794 to 86775647 17853 + lncRNA gene predicted gene, 42085
Tssr3625 11 86757836 to 86757876 40 + TSS region transcription start site region 3625
Tssr103897 11 86757879 to 86757911 32 + TSS region transcription start site region 103897
Tssr103898 11 86757917 to 86757928 11 + TSS region transcription start site region 103898
Tssr3626 11 86758164 to 86758189 25 + TSS region transcription start site region 3626
Tssr103899 11 86758228 to 86758232 4 + TSS region transcription start site region 103899
Dhx40 11 86768846 to 86807746 38900 - protein coding gene DEAH (Asp-Glu-Ala-His) box polypeptide 40
Tssr109922 11 86805271 to 86805275 4 - TSS region transcription start site region 109922
Cpgi3478 11 86807119 to 86807966 847 CpG island CpG island 3478
Tssr109923 11 86807541 to 86807553 12 - TSS region transcription start site region 109923
Tssr109924 11 86807565 to 86807622 57 - TSS region transcription start site region 109924
Tssr109925 11 86807624 to 86807645 21 - TSS region transcription start site region 109925
Tssr3627 11 86807658 to 86807661 3 - TSS region transcription start site region 3627
Gm33742 11 86818625 to 86867595 48970 - lncRNA gene predicted gene, 33742
Tssr109926 11 86828460 to 86828471 11 - TSS region transcription start site region 109926
Tssr109927 11 86838722 to 86838726 4 - TSS region transcription start site region 109927