Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:86596807-86696852

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vmp1 11 86583854 to 86683822 99968 - protein coding gene vacuole membrane protein 1
Gm46289 11 86590528 to 86598495 7967 + lncRNA gene predicted gene, 46289
Tssr109875 11 86598611 to 86598651 40 - TSS region transcription start site region 109875
Tssr103885 11 86598767 to 86598798 31 + TSS region transcription start site region 103885
Tssr3624 11 86600042 to 86600094 52 + TSS region transcription start site region 3624
Tssr109876 11 86602223 to 86602251 28 - TSS region transcription start site region 109876
Tssr109877 11 86602253 to 86602303 50 - TSS region transcription start site region 109877
Tssr109878 11 86602334 to 86602345 11 - TSS region transcription start site region 109878
Tssr109879 11 86602361 to 86602372 11 - TSS region transcription start site region 109879
Tssr103886 11 86602361 to 86602386 25 + TSS region transcription start site region 103886
Tssr103887 11 86604013 to 86604040 27 + TSS region transcription start site region 103887
Tssr103888 11 86604057 to 86604066 9 + TSS region transcription start site region 103888
Tssr103889 11 86613338 to 86613372 34 + TSS region transcription start site region 103889
Tssr109880 11 86614282 to 86614286 4 - TSS region transcription start site region 109880
Tssr103890 11 86614655 to 86614662 7 + TSS region transcription start site region 103890
Tssr103891 11 86618799 to 86618804 5 + TSS region transcription start site region 103891
Tssr109881 11 86624286 to 86624297 11 - TSS region transcription start site region 109881
Tssr109882 11 86624392 to 86624435 43 - TSS region transcription start site region 109882
Tssr103892 11 86629630 to 86629658 28 + TSS region transcription start site region 103892
Tssr103893 11 86630241 to 86630246 5 + TSS region transcription start site region 103893
Gm11478 11 86630428 to 86631026 598 - pseudogene predicted gene 11478
Tssr109883 11 86631062 to 86631064 2 - TSS region transcription start site region 109883
Tssr109884 11 86635511 to 86635535 24 - TSS region transcription start site region 109884
Tssr103894 11 86646807 to 86646852 45 + TSS region transcription start site region 103894
Tssr109885 11 86648231 to 86648245 14 - TSS region transcription start site region 109885
Tssr109886 11 86671169 to 86671186 17 - TSS region transcription start site region 109886
Cpgi3476 11 86683446 to 86684243 797 CpG island CpG island 3476
Tssr109887 11 86683499 to 86683548 49 - TSS region transcription start site region 109887
Tssr109888 11 86683761 to 86683847 86 - TSS region transcription start site region 109888
Tssr103895 11 86683886 to 86683897 11 + TSS region transcription start site region 103895
Tssr109889 11 86683975 to 86683986 11 - TSS region transcription start site region 109889
Ptrh2 11 86683985 to 86692457 8472 + protein coding gene peptidyl-tRNA hydrolase 2
Tssr103896 11 86684034 to 86684089 55 + TSS region transcription start site region 103896
Tssr109890 11 86688780 to 86688785 5 - TSS region transcription start site region 109890
Cltc 11 86694610 to 86757742 63132 - protein coding gene clathrin, heavy polypeptide (Hc)
Tssr109891 11 86694990 to 86695006 16 - TSS region transcription start site region 109891
Tssr109892 11 86695064 to 86695090 26 - TSS region transcription start site region 109892
Tssr109893 11 86695326 to 86695347 21 - TSS region transcription start site region 109893
Tssr109894 11 86695353 to 86695366 13 - TSS region transcription start site region 109894