Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:86479009-86564807

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi3474	11	86484042 to 86485299	1257		CpG island	CpG island 3474
Tssr109848	11	86484312 to 86484350	38	-	TSS region	transcription start site region 109848
Tssr103868	11	86484624 to 86484643	19	+	TSS region	transcription start site region 103868
Tssr103869	11	86484647 to 86484716	69	+	TSS region	transcription start site region 103869
Rnft1	11	86484657 to 86499007	14350	+	protein coding gene	ring finger protein, transmembrane 1
Tssr103870	11	86484719 to 86484731	12	+	TSS region	transcription start site region 103870
Tssr103871	11	86484739 to 86484750	11	+	TSS region	transcription start site region 103871
Tssr109849	11	86485252 to 86485260	8	-	TSS region	transcription start site region 109849
Rps6kb1	11	86499009 to 86544807	45798	-	protein coding gene	ribosomal protein S6 kinase, polypeptide 1
Cpgi3475	11	86544055 to 86545118	1063		CpG island	CpG island 3475
Tssr109850	11	86544754 to 86544781	27	-	TSS region	transcription start site region 109850
Tssr103872	11	86544944 to 86544978	34	+	TSS region	transcription start site region 103872
Tssr103873	11	86544982 to 86544999	17	+	TSS region	transcription start site region 103873
Tubd1	11	86544991 to 86567360	22369	+	protein coding gene	tubulin, delta 1
Tssr103874	11	86545011 to 86545050	39	+	TSS region	transcription start site region 103874
Tssr103875	11	86545068 to 86545080	12	+	TSS region	transcription start site region 103875
Tssr103876	11	86545173 to 86545193	20	+	TSS region	transcription start site region 103876