Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:85831686-86121920

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
2610027K06Rik 11 85791661 to 85832223 40562 - lncRNA gene RIKEN cDNA 2610027K06 gene
Tssr103854 11 85831756 to 85831775 19 + TSS region transcription start site region 103854
Tssr103855 11 85831791 to 85831805 14 + TSS region transcription start site region 103855
Cpgi3458 11 85831837 to 85833629 1792 CpG island CpG island 3458
Tssr109817 11 85832294 to 85832310 16 - TSS region transcription start site region 109817
Tbx2 11 85832615 to 85841948 9333 + protein coding gene T-box 2
Tssr103856 11 85832761 to 85832776 15 + TSS region transcription start site region 103856
Tssr103857 11 85832801 to 85832827 26 + TSS region transcription start site region 103857
Tssr103858 11 85832839 to 85832850 11 + TSS region transcription start site region 103858
Tssr103859 11 85832925 to 85832949 24 + TSS region transcription start site region 103859
Tssr103860 11 85832967 to 85832986 19 + TSS region transcription start site region 103860
Cpgi3459 11 85834594 to 85834829 235 CpG island CpG island 3459
Cpgi3460 11 85836879 to 85838672 1793 CpG island CpG island 3460
Cpgi3461 11 85840345 to 85841169 824 CpG island CpG island 3461
Cpgi3462 11 85841766 to 85842341 575 CpG island CpG island 3462
Cpgi3463 11 85842971 to 85844850 1879 CpG island CpG island 3463
Gm11444 11 85846790 to 85850333 3543 - protein coding gene predicted gene 11444
Cpgi3464 11 85849001 to 85849316 315 CpG island CpG island 3464
Tssr103861 11 85886060 to 85886073 13 + TSS region transcription start site region 103861
Cpgi3465 11 85886298 to 85886753 455 CpG island CpG island 3465
Tssr103862 11 85886360 to 85886418 58 + TSS region transcription start site region 103862
Tbx4 11 85886422 to 85916097 29675 + protein coding gene T-box 4
Cpgi3466 11 85888362 to 85888821 459 CpG island CpG island 3466
Tssr103863 11 85889833 to 85889848 15 + TSS region transcription start site region 103863
Cpgi3467 11 85889845 to 85891079 1234 CpG island CpG island 3467
Tssr103864 11 85889981 to 85890006 25 + TSS region transcription start site region 103864
Cpgi3468 11 85894792 to 85895474 682 CpG island CpG island 3468
Cpgi3469 11 85926446 to 85926649 203 CpG island CpG island 3469
Tssr109818 11 85929839 to 85929850 11 - TSS region transcription start site region 109818
Gm11443 11 85950495 to 85950973 478 + pseudogene predicted gene 11443
Cpgi3470 11 85976686 to 85976920 234 CpG island CpG island 3470
D11Mit165 11 85983302 to 85983443 141 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 165
Gm20759 11 86002658 to 86024350 21692 - lncRNA gene predicted gene, 20759
Brip1 11 86058138 to 86201193 143055 - protein coding gene BRCA1 interacting protein C-terminal helicase 1
Tssr109819 11 86087897 to 86087903 6 - TSS region transcription start site region 109819