Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Bcas3 | 11 | 472891 | + | protein coding gene | breast carcinoma amplified sequence 3 | |
Bcas3os2 | 11 | 8847 | - | antisense lncRNA gene | breast carcinoma amplified sequence 3 opposite strand 2 | |
Tssr109815 | 11 | 33 | - | TSS region | transcription start site region 109815 | |
Gm23473 | 11 | 115 | + | rRNA gene | predicted gene, 23473 | |
2610027K06Rik | 11 | 40562 | - | lncRNA gene | RIKEN cDNA 2610027K06 gene | |
Tssr109816 | 11 | 21 | - | TSS region | transcription start site region 109816 | |
Tssr103846 | 11 | 9 | + | TSS region | transcription start site region 103846 | |
Tssr103847 | 11 | 8 | + | TSS region | transcription start site region 103847 | |
Tssr103848 | 11 | 15 | + | TSS region | transcription start site region 103848 | |
Tssr103849 | 11 | 40 | + | TSS region | transcription start site region 103849 | |
Tssr103850 | 11 | 7 | + | TSS region | transcription start site region 103850 | |
Tssr103851 | 11 | 7 | + | TSS region | transcription start site region 103851 | |
Cpgi3456 | 11 | 1233 | CpG island | CpG island 3456 | ||
Tssr103852 | 11 | 12 | + | TSS region | transcription start site region 103852 | |
Cpgi3457 | 11 | 359 | CpG island | CpG island 3457 | ||
Tssr103853 | 11 | 40 | + | TSS region | transcription start site region 103853 | |
Tssr103854 | 11 | 19 | + | TSS region | transcription start site region 103854 | |
Tssr103855 | 11 | 14 | + | TSS region | transcription start site region 103855 | |
Cpgi3458 | 11 | 1792 | CpG island | CpG island 3458 | ||
Tssr109817 | 11 | 16 | - | TSS region | transcription start site region 109817 | |
Tbx2 | 11 | 9333 | + | protein coding gene | T-box 2 | |
Tssr103856 | 11 | 15 | + | TSS region | transcription start site region 103856 | |
Tssr103857 | 11 | 26 | + | TSS region | transcription start site region 103857 | |
Tssr103858 | 11 | 11 | + | TSS region | transcription start site region 103858 | |
Tssr103859 | 11 | 24 | + | TSS region | transcription start site region 103859 | |
Tssr103860 | 11 | 19 | + | TSS region | transcription start site region 103860 | |
Cpgi3459 | 11 | 235 | CpG island | CpG island 3459 | ||
Cpgi3460 | 11 | 1793 | CpG island | CpG island 3460 | ||
Cpgi3461 | 11 | 824 | CpG island | CpG island 3461 | ||
Cpgi3462 | 11 | 575 | CpG island | CpG island 3462 | ||
Cpgi3463 | 11 | 1879 | CpG island | CpG island 3463 | ||
Gm11444 | 11 | 3543 | - | protein coding gene | predicted gene 11444 | |
Cpgi3464 | 11 | 315 | CpG island | CpG island 3464 | ||
Tssr103861 | 11 | 13 | + | TSS region | transcription start site region 103861 | |
Cpgi3465 | 11 | 455 | CpG island | CpG island 3465 | ||
Tssr103862 | 11 | 58 | + | TSS region | transcription start site region 103862 | |
Tbx4 | 11 | 29675 | + | protein coding gene | T-box 4 | |
Cpgi3466 | 11 | 459 | CpG island | CpG island 3466 | ||
Tssr103863 | 11 | 15 | + | TSS region | transcription start site region 103863 | |
Cpgi3467 | 11 | 1234 | CpG island | CpG island 3467 | ||
Tssr103864 | 11 | 25 | + | TSS region | transcription start site region 103864 | |
Cpgi3468 | 11 | 682 | CpG island | CpG island 3468 | ||
Cpgi3469 | 11 | 203 | CpG island | CpG island 3469 | ||
Tssr109818 | 11 | 11 | - | TSS region | transcription start site region 109818 | |
Gm11443 | 11 | 478 | + | pseudogene | predicted gene 11443 | |
Cpgi3470 | 11 | 234 | CpG island | CpG island 3470 | ||
D11Mit165 | 11 | 141 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 165 | ||
Gm20759 | 11 | 21692 | - | lncRNA gene | predicted gene, 20759 | |
Brip1 | 11 | 143055 | - | protein coding gene | BRCA1 interacting protein C-terminal helicase 1 | |
Tssr109819 | 11 | 6 | - | TSS region | transcription start site region 109819 | |
Tssr109820 | 11 | 3 | - | TSS region | transcription start site region 109820 | |
Atp5l-ps2 | 11 | 313 | + | pseudogene | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, pseudogene 2 | |
Cpgi3471 | 11 | 1061 | CpG island | CpG island 3471 | ||
Tssr109821 | 11 | 56 | - | TSS region | transcription start site region 109821 | |
Tssr103865 | 11 | 67 | + | TSS region | transcription start site region 103865 | |
Brip1os | 11 | 103073 | + | antisense lncRNA gene | BRCA1 interacting protein C-terminal helicase 1, opposite strand | |
Tssr103866 | 11 | 19 | + | TSS region | transcription start site region 103866 | |
Tssr109822 | 11 | 23 | - | TSS region | transcription start site region 109822 | |
Tssr109823 | 11 | 11 | - | TSS region | transcription start site region 109823 | |
Ints2 | 11 | 46894 | - | protein coding gene | integrator complex subunit 2 | |
Tssr103867 | 11 | 4 | + | TSS region | transcription start site region 103867 | |
Tssr109824 | 11 | 32 | - | TSS region | transcription start site region 109824 | |
Cpgi3472 | 11 | 695 | CpG island | CpG island 3472 | ||
Tssr109825 | 11 | 2 | - | TSS region | transcription start site region 109825 | |
Tssr109826 | 11 | 15 | - | TSS region | transcription start site region 109826 | |
Tssr109827 | 11 | 19 | - | TSS region | transcription start site region 109827 | |
Tssr109828 | 11 | 11 | - | TSS region | transcription start site region 109828 | |
n-TQttg2 | 11 | 71 | + | tRNA gene | nuclear encoded tRNA glutamine 2 (anticodon TTG) | |
Med13 | 11 | 90569 | - | protein coding gene | mediator complex subunit 13 | |
Tssr109829 | 11 | 18 | - | TSS region | transcription start site region 109829 | |
Tssr109830 | 11 | 17 | - | TSS region | transcription start site region 109830 | |
Tssr109831 | 11 | 7 | - | TSS region | transcription start site region 109831 | |
Tssr109832 | 11 | 19 | - | TSS region | transcription start site region 109832 | |
Tssr109833 | 11 | 6 | - | TSS region | transcription start site region 109833 | |
Tssr109834 | 11 | 14 | - | TSS region | transcription start site region 109834 | |
Tssr109835 | 11 | 5 | - | TSS region | transcription start site region 109835 | |
Tssr109836 | 11 | 9 | - | TSS region | transcription start site region 109836 | |
Gm25427 | 11 | 102 | + | unclassified non-coding RNA gene | predicted gene, 25427 | |
Tssr109837 | 11 | 1 | - | TSS region | transcription start site region 109837 | |
Tssr109838 | 11 | 1 | - | TSS region | transcription start site region 109838 | |
Tssr109839 | 11 | 3 | - | TSS region | transcription start site region 109839 | |
Cpgi3473 | 11 | 1343 | CpG island | CpG island 3473 | ||
Tssr109840 | 11 | 39 | - | TSS region | transcription start site region 109840 | |
Tssr109841 | 11 | 44 | - | TSS region | transcription start site region 109841 | |
Tssr109842 | 11 | 12 | - | TSS region | transcription start site region 109842 | |
Tssr109843 | 11 | 5 | - | TSS region | transcription start site region 109843 | |
Tssr109844 | 11 | 11 | - | TSS region | transcription start site region 109844 | |
Tssr109845 | 11 | 9 | - | TSS region | transcription start site region 109845 | |
Tssr109846 | 11 | 23 | - | TSS region | transcription start site region 109846 | |
Tssr109847 | 11 | 38 | - | TSS region | transcription start site region 109847 | |
Gm38937 | 11 | 24087 | - | lncRNA gene | predicted gene, 38937 | |
Gm33528 | 11 | 2984 | + | lncRNA gene | predicted gene, 33528 | |
Gm18286 | 11 | 516 | - | pseudogene | predicted gene, 18286 | |
Gm23667 | 11 | 119 | + | rRNA gene | predicted gene, 23667 | |
Gm26439 | 11 | 105 | - | snRNA gene | predicted gene, 26439 | |
D11Mit211 | 11 | 137 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 211 | ||
Cpgi3474 | 11 | 1257 | CpG island | CpG island 3474 | ||
Tssr109848 | 11 | 38 | - | TSS region | transcription start site region 109848 | |
Tssr103868 | 11 | 19 | + | TSS region | transcription start site region 103868 | |
Tssr103869 | 11 | 69 | + | TSS region | transcription start site region 103869 | |
Rnft1 | 11 | 14350 | + | protein coding gene | ring finger protein, transmembrane 1 | |
Tssr103870 | 11 | 12 | + | TSS region | transcription start site region 103870 | |
Tssr103871 | 11 | 11 | + | TSS region | transcription start site region 103871 | |
Tssr109849 | 11 | 8 | - | TSS region | transcription start site region 109849 | |
Rps6kb1 | 11 | 45798 | - | protein coding gene | ribosomal protein S6 kinase, polypeptide 1 | |
Cpgi3475 | 11 | 1063 | CpG island | CpG island 3475 | ||
Tssr109850 | 11 | 27 | - | TSS region | transcription start site region 109850 | |
Tssr103872 | 11 | 34 | + | TSS region | transcription start site region 103872 | |
Tssr103873 | 11 | 17 | + | TSS region | transcription start site region 103873 | |
Tubd1 | 11 | 22369 | + | protein coding gene | tubulin, delta 1 | |
Tssr103874 | 11 | 39 | + | TSS region | transcription start site region 103874 | |
Tssr103875 | 11 | 12 | + | TSS region | transcription start site region 103875 | |
Tssr103876 | 11 | 20 | + | TSS region | transcription start site region 103876 | |
D11Wsu48e | 11 | 255 | DNA segment | DNA segment, Chr 11, Wayne State University 48, expressed | ||
Tssr109851 | 11 | 6 | - | TSS region | transcription start site region 109851 | |
Tssr103877 | 11 | 26 | + | TSS region | transcription start site region 103877 | |
Tssr103878 | 11 | 14 | + | TSS region | transcription start site region 103878 | |
Gm9975 | 11 | 2273 | unclassified non-coding RNA gene | predicted gene 9975 | ||
Tssr3622 | 11 | 6 | + | TSS region | transcription start site region 3622 | |
Tssr103879 | 11 | 26 | + | TSS region | transcription start site region 103879 | |
Tssr109852 | 11 | 5 | - | TSS region | transcription start site region 109852 | |
2210402C17Rik | 11 | 493 | unclassified gene | RIKEN cDNA 2210402C17 gene | ||
Tssr109853 | 11 | 4 | - | TSS region | transcription start site region 109853 | |
Vmp1 | 11 | 99968 | - | protein coding gene | vacuole membrane protein 1 | |
Mir21a | 11 | 91 | - | miRNA gene | microRNA 21a | |
Tssr109854 | 11 | 9 | - | TSS region | transcription start site region 109854 | |
Tssr109855 | 11 | 51 | - | TSS region | transcription start site region 109855 | |
Tssr109856 | 11 | 15 | - | TSS region | transcription start site region 109856 | |
Tssr109857 | 11 | 20 | - | TSS region | transcription start site region 109857 | |
Tssr109858 | 11 | 17 | - | TSS region | transcription start site region 109858 | |
Tssr109859 | 11 | 14 | - | TSS region | transcription start site region 109859 | |
Tssr109860 | 11 | 21 | - | TSS region | transcription start site region 109860 | |
Tssr109861 | 11 | 37 | - | TSS region | transcription start site region 109861 | |
Tssr109862 | 11 | 13 | - | TSS region | transcription start site region 109862 | |
Tssr109863 | 11 | 13 | - | TSS region | transcription start site region 109863 | |
Tssr109864 | 11 | 5 | - | TSS region | transcription start site region 109864 | |
Tssr109865 | 11 | 9 | - | TSS region | transcription start site region 109865 | |
Tssr109866 | 11 | 5 | - | TSS region | transcription start site region 109866 | |
Tssr109867 | 11 | 9 | - | TSS region | transcription start site region 109867 | |
Tssr109868 | 11 | 19 | - | TSS region | transcription start site region 109868 | |
Tssr109869 | 11 | 31 | - | TSS region | transcription start site region 109869 | |
Tssr109870 | 11 | 54 | - | TSS region | transcription start site region 109870 | |
Tssr109871 | 11 | 25 | - | TSS region | transcription start site region 109871 | |
Tssr109872 | 11 | 16 | - | TSS region | transcription start site region 109872 | |
Tssr109873 | 11 | 9 | - | TSS region | transcription start site region 109873 | |
Tssr109874 | 11 | 11 | - | TSS region | transcription start site region 109874 | |
Tssr103880 | 11 | 19 | + | TSS region | transcription start site region 103880 | |
Tssr103881 | 11 | 25 | + | TSS region | transcription start site region 103881 | |
Tssr103882 | 11 | 10 | + | TSS region | transcription start site region 103882 | |
Gm46289 | 11 | 7967 | + | lncRNA gene | predicted gene, 46289 | |
Tssr103883 | 11 | 11 | + | TSS region | transcription start site region 103883 | |
Tssr103884 | 11 | 16 | + | TSS region | transcription start site region 103884 | |
Tssr3623 | 11 | 9 | + | TSS region | transcription start site region 3623 |