Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:85321641-85771642

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppm1d 11 85311254 to 85347071 35817 + protein coding gene protein phosphatase 1D magnesium-dependent, delta isoform
Tssr103830 11 85339668 to 85339677 9 + TSS region transcription start site region 103830
Tssr103831 11 85339699 to 85339759 60 + TSS region transcription start site region 103831
Tssr103832 11 85341127 to 85341133 6 + TSS region transcription start site region 103832
Cpgi3455 11 85352600 to 85353452 852 CpG island CpG island 3455
Tssr109810 11 85352625 to 85352640 15 - TSS region transcription start site region 109810
Tssr103833 11 85352775 to 85352797 22 + TSS region transcription start site region 103833
Tssr103834 11 85353156 to 85353219 63 + TSS region transcription start site region 103834
Bcas3 11 85353167 to 85826058 472891 + protein coding gene breast carcinoma amplified sequence 3
Tssr103835 11 85492720 to 85492732 12 + TSS region transcription start site region 103835
Tssr103836 11 85492737 to 85492751 14 + TSS region transcription start site region 103836
Gm23765 11 85493759 to 85493905 146 + snRNA gene predicted gene, 23765
Tssr109811 11 85524944 to 85524951 7 - TSS region transcription start site region 109811
Tssr109812 11 85546641 to 85546642 1 - TSS region transcription start site region 109812
Tssr103837 11 85549592 to 85549595 3 + TSS region transcription start site region 103837
D11Mit324 11 85583427 to 85583528 101 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 324
D11Mit220 11 85583428 to 85583540 112 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 220
D11Mit324.2 11 85583506 to 85583678 172 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 324.2
7030407E18Rik 11 85598479 to 85602216 3737 unclassified gene RIKEN cDNA 7030407E18 gene
Tssr103838 11 85614820 to 85614824 4 + TSS region transcription start site region 103838
Tssr103839 11 85683852 to 85683867 15 + TSS region transcription start site region 103839
Tssr103840 11 85688323 to 85688326 3 + TSS region transcription start site region 103840
Bcas3os1 11 85702200 to 85719744 17544 - antisense lncRNA gene breast carcinoma amplified sequence 3, opposite strand 1
Tssr103841 11 85713763 to 85713803 40 + TSS region transcription start site region 103841
Tssr109813 11 85719737 to 85719750 13 - TSS region transcription start site region 109813
Tssr103842 11 85739881 to 85739892 11 + TSS region transcription start site region 103842
Tssr103843 11 85739906 to 85739917 11 + TSS region transcription start site region 103843
Tssr103844 11 85739931 to 85739947 16 + TSS region transcription start site region 103844
Tssr103845 11 85739948 to 85739965 17 + TSS region transcription start site region 103845
Mir5110 11 85760616 to 85760702 86 - miRNA gene microRNA 5110
Bcas3os2 11 85766833 to 85775680 8847 - antisense lncRNA gene breast carcinoma amplified sequence 3 opposite strand 2
Tssr109814 11 85769127 to 85769138 11 - TSS region transcription start site region 109814