Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:85120404-85231145

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Skts-fp2 11 58828440 to 85175703 26347263 QTL skin tumor susceptibility in FVB and PWK 2
Usp32 11 84984437 to 85140042 155605 - protein coding gene ubiquitin specific peptidase 32
Cpgi3450 11 85139359 to 85140611 1252 CpG island CpG island 3450
Tssr109803 11 85139899 to 85139922 23 - TSS region transcription start site region 109803
Tssr109804 11 85139939 to 85139971 32 - TSS region transcription start site region 109804
D11Mit159 11 85154238 to 85154359 121 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 159
Gm23506 11 85163077 to 85163183 106 + snRNA gene predicted gene, 23506
Cpgi3451 11 85170104 to 85170382 278 CpG island CpG island 3451
1700125H20Rik 11 85170404 to 85181145 10741 + protein coding gene RIKEN cDNA 1700125H20 gene
Tssr3620 11 85171068 to 85171073 5 + TSS region transcription start site region 3620
Tssr103818 11 85171074 to 85171086 12 + TSS region transcription start site region 103818
Tssr103819 11 85171097 to 85171104 7 + TSS region transcription start site region 103819
D11Mit178 11 85175558 to 85175703 145 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 178
Tssr3621 11 85177998 to 85178011 13 + TSS region transcription start site region 3621
Tssr103820 11 85178034 to 85178041 7 + TSS region transcription start site region 103820
Cpgi3452 11 85182952 to 85183418 466 CpG island CpG island 3452
Appbp2 11 85191308 to 85235120 43812 - protein coding gene amyloid beta precursor protein (cytoplasmic tail) binding protein 2
Tssr103821 11 85194333 to 85194352 19 + TSS region transcription start site region 103821
Tssr103822 11 85194357 to 85194370 13 + TSS region transcription start site region 103822
Gm38935 11 85204331 to 85231641 27310 + lncRNA gene predicted gene, 38935
Akirin1-ps 11 85216597 to 85217054 457 + pseudogene akirin 1, pseudogene