Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:84834345-85024451

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bmiq10 11 36000000 to 85000000 49000000 QTL body mass index QTL 10
Alcp2 11 72318970 to 84840636 12521666 QTL alcohol preference locus 2, female specific
Ggnbp2 11 84832361 to 84870779 38418 - protein coding gene gametogenetin binding protein 2
Tssr109784 11 84840301 to 84840330 29 - TSS region transcription start site region 109784
Tssr109785 11 84840365 to 84840377 12 - TSS region transcription start site region 109785
D11Mit195 11 84840498 to 84840636 138 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 195
Tssr109786 11 84846300 to 84846331 31 - TSS region transcription start site region 109786
Tssr109787 11 84846481 to 84846502 21 - TSS region transcription start site region 109787
D11Ertd437e 11 84851106 to 84851316 210 DNA segment DNA segment, Chr 11, ERATO Doi 437, expressed
Tssr109788 11 84860601 to 84860630 29 - TSS region transcription start site region 109788
Cpgi3445 11 84869524 to 84871274 1750 CpG island CpG island 3445
Ggnbp2os 11 84870005 to 84871631 1626 + lncRNA gene gametogenetin binding protein 2, opposite strand
Tssr109789 11 84870031 to 84870107 76 - TSS region transcription start site region 109789
Tssr109790 11 84870128 to 84870182 54 - TSS region transcription start site region 109790
Tssr109791 11 84870188 to 84870230 42 - TSS region transcription start site region 109791
Tssr109792 11 84870696 to 84870711 15 - TSS region transcription start site region 109792
Tssr109793 11 84870712 to 84870807 95 - TSS region transcription start site region 109793
Tssr109794 11 84870812 to 84870823 11 - TSS region transcription start site region 109794
Tssr103808 11 84870861 to 84870921 60 + TSS region transcription start site region 103808
Tssr109795 11 84871734 to 84871738 4 - TSS region transcription start site region 109795
Pigw 11 84876315 to 84880285 3970 - protein coding gene phosphatidylinositol glycan anchor biosynthesis, class W
Cpgi3446 11 84879650 to 84880924 1274 CpG island CpG island 3446
Tssr103809 11 84879880 to 84879922 42 + TSS region transcription start site region 103809
Myo19 11 84880192 to 84911131 30939 + protein coding gene myosin XIX
Tssr109796 11 84880249 to 84880299 50 - TSS region transcription start site region 109796
Tssr103810 11 84880308 to 84880373 65 + TSS region transcription start site region 103810
Tssr103811 11 84880376 to 84880391 15 + TSS region transcription start site region 103811
Gm23564 11 84893087 to 84893153 66 + miRNA gene predicted gene, 23564
Tssr103812 11 84901129 to 84901146 17 + TSS region transcription start site region 103812
Znhit3 11 84910950 to 84916356 5406 - protein coding gene zinc finger, HIT type 3
Cpgi3447 11 84915985 to 84916485 500 CpG island CpG island 3447
Tssr109797 11 84916234 to 84916260 26 - TSS region transcription start site region 109797
Tssr109798 11 84916338 to 84916371 33 - TSS region transcription start site region 109798
D11Mit221 11 84929345 to 84929451 106 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 221
Gm33028 11 84940261 to 84943855 3594 + lncRNA gene predicted gene, 33028
Gm32917 11 84943891 to 84951103 7212 - lncRNA gene predicted gene, 32917
Cpgi3448 11 84943960 to 84944153 193 CpG island CpG island 3448
Tssr109799 11 84944789 to 84944800 11 - TSS region transcription start site region 109799
Tssr103813 11 84944914 to 84944921 7 + TSS region transcription start site region 103813
Cpgi3449 11 84957521 to 84958385 864 CpG island CpG island 3449
Tssr103814 11 84957775 to 84957799 24 + TSS region transcription start site region 103814
Car4 11 84957786 to 84966044 8258 + protein coding gene carbonic anhydrase 4
Tssr103815 11 84957802 to 84957813 11 + TSS region transcription start site region 103815
Tssr103816 11 84957817 to 84957835 18 + TSS region transcription start site region 103816
D11Mit121 11 84970026 to 84970145 119 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 121
Usp32 11 84984437 to 85140042 155605 - protein coding gene ubiquitin specific peptidase 32