Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:84542330-84842454

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Alcp2 11 72318970 to 84840636 12521666 QTL alcohol preference locus 2, female specific
Cpgi3437 11 84570481 to 84570640 159 CpG island CpG island 3437
D11Mit281 11 84624549 to 84624670 121 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 281
Cpgi3438 11 84642205 to 84643207 1002 CpG island CpG island 3438
D11Mit355 11 84692330 to 84692454 124 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 355
1700109G15Rik 11 84716976 to 84720432 3456 - lincRNA gene RIKEN cDNA 1700109G15 gene
Cpgi3439 11 84724122 to 84724430 308 CpG island CpG island 3439
Cpgi3440 11 84760906 to 84761079 173 CpG island CpG island 3440
Gm11431 11 84763855 to 84777829 13974 - lincRNA gene predicted gene 11431
Cpgi3441 11 84764584 to 84764855 271 CpG island CpG island 3441
Cpgi3442 11 84798108 to 84798308 200 CpG island CpG island 3442
Mrm1 11 84813061 to 84819515 6454 - protein coding gene mitochondrial rRNA methyltransferase 1
Cpgi3443 11 84818417 to 84819810 1393 CpG island CpG island 3443
Tssr103807 11 84818832 to 84818870 38 + TSS region transcription start site region 103807
Tssr109768 11 84819390 to 84819415 25 - TSS region transcription start site region 109768
Tssr109769 11 84819450 to 84819471 21 - TSS region transcription start site region 109769
Dhrs11 11 84820856 to 84828994 8138 - protein coding gene dehydrogenase/reductase (SDR family) member 11
Tssr109770 11 84823540 to 84823553 13 - TSS region transcription start site region 109770
Tssr109771 11 84823588 to 84823610 22 - TSS region transcription start site region 109771
Tssr109772 11 84823668 to 84823695 27 - TSS region transcription start site region 109772
Tssr109773 11 84823718 to 84823729 11 - TSS region transcription start site region 109773
Tssr109774 11 84825593 to 84825604 11 - TSS region transcription start site region 109774
Tssr109775 11 84826283 to 84826301 18 - TSS region transcription start site region 109775
Tssr109776 11 84827274 to 84827294 20 - TSS region transcription start site region 109776
Tssr109777 11 84827298 to 84827311 13 - TSS region transcription start site region 109777
Tssr109778 11 84827361 to 84827374 13 - TSS region transcription start site region 109778
Tssr109779 11 84827646 to 84827656 10 - TSS region transcription start site region 109779
Cpgi3444 11 84828539 to 84829598 1059 CpG island CpG island 3444
Tssr109780 11 84828935 to 84828944 9 - TSS region transcription start site region 109780
Tssr109781 11 84828953 to 84828966 13 - TSS region transcription start site region 109781
Tssr109782 11 84828981 to 84829023 42 - TSS region transcription start site region 109782
Tssr109783 11 84829123 to 84829132 9 - TSS region transcription start site region 109783
4930502E09Rik 11 84829178 to 84830868 1690 + lncRNA gene RIKEN cDNA 4930502E09 gene
Ggnbp2 11 84832361 to 84870779 38418 - protein coding gene gametogenetin binding protein 2
Tssr109784 11 84840301 to 84840330 29 - TSS region transcription start site region 109784
Tssr109785 11 84840365 to 84840377 12 - TSS region transcription start site region 109785
D11Mit195 11 84840498 to 84840636 138 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 195