Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Bmiq10 | 11 | 49000000 | QTL | body mass index QTL 10 | ||
Skts-fp2 | 11 | 26347263 | QTL | skin tumor susceptibility in FVB and PWK 2 | ||
Alcp2 | 11 | 12521666 | QTL | alcohol preference locus 2, female specific | ||
Lhx1os | 11 | 10171 | + | lincRNA gene | LIM homeobox 1, opposite strand | |
Cpgi3437 | 11 | 159 | CpG island | CpG island 3437 | ||
D11Mit281 | 11 | 121 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 281 | ||
Cpgi3438 | 11 | 1002 | CpG island | CpG island 3438 | ||
D11Mit355 | 11 | 124 | DNA segment | DNA Segment, Chr 11 Massachusetts Institute of Technology 355 | ||
1700109G15Rik | 11 | 3456 | - | lincRNA gene | RIKEN cDNA 1700109G15 gene | |
Cpgi3439 | 11 | 308 | CpG island | CpG island 3439 | ||
Cpgi3440 | 11 | 173 | CpG island | CpG island 3440 | ||
Gm11431 | 11 | 13974 | - | lincRNA gene | predicted gene 11431 | |
Cpgi3441 | 11 | 271 | CpG island | CpG island 3441 | ||
Cpgi3442 | 11 | 200 | CpG island | CpG island 3442 | ||
Mrm1 | 11 | 6454 | - | protein coding gene | mitochondrial rRNA methyltransferase 1 | |
Cpgi3443 | 11 | 1393 | CpG island | CpG island 3443 | ||
Tssr103807 | 11 | 38 | + | TSS region | transcription start site region 103807 | |
Tssr109768 | 11 | 25 | - | TSS region | transcription start site region 109768 | |
Tssr109769 | 11 | 21 | - | TSS region | transcription start site region 109769 | |
Dhrs11 | 11 | 8138 | - | protein coding gene | dehydrogenase/reductase (SDR family) member 11 | |
Tssr109770 | 11 | 13 | - | TSS region | transcription start site region 109770 | |
Tssr109771 | 11 | 22 | - | TSS region | transcription start site region 109771 | |
Tssr109772 | 11 | 27 | - | TSS region | transcription start site region 109772 | |
Tssr109773 | 11 | 11 | - | TSS region | transcription start site region 109773 | |
Tssr109774 | 11 | 11 | - | TSS region | transcription start site region 109774 | |
Tssr109775 | 11 | 18 | - | TSS region | transcription start site region 109775 | |
Tssr109776 | 11 | 20 | - | TSS region | transcription start site region 109776 | |
Tssr109777 | 11 | 13 | - | TSS region | transcription start site region 109777 | |
Tssr109778 | 11 | 13 | - | TSS region | transcription start site region 109778 | |
Tssr109779 | 11 | 10 | - | TSS region | transcription start site region 109779 | |
Cpgi3444 | 11 | 1059 | CpG island | CpG island 3444 | ||
Tssr109780 | 11 | 9 | - | TSS region | transcription start site region 109780 | |
Tssr109781 | 11 | 13 | - | TSS region | transcription start site region 109781 | |
Tssr109782 | 11 | 42 | - | TSS region | transcription start site region 109782 | |
Tssr109783 | 11 | 9 | - | TSS region | transcription start site region 109783 | |
4930502E09Rik | 11 | 1690 | + | lncRNA gene | RIKEN cDNA 4930502E09 gene | |
Ggnbp2 | 11 | 38418 | - | protein coding gene | gametogenetin binding protein 2 | |
Tssr109784 | 11 | 29 | - | TSS region | transcription start site region 109784 | |
Tssr109785 | 11 | 12 | - | TSS region | transcription start site region 109785 | |
D11Mit195 | 11 | 138 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 195 | ||
Tssr109786 | 11 | 31 | - | TSS region | transcription start site region 109786 | |
Tssr109787 | 11 | 21 | - | TSS region | transcription start site region 109787 | |
D11Ertd437e | 11 | 210 | DNA segment | DNA segment, Chr 11, ERATO Doi 437, expressed | ||
Tssr109788 | 11 | 29 | - | TSS region | transcription start site region 109788 | |
Cpgi3445 | 11 | 1750 | CpG island | CpG island 3445 | ||
Ggnbp2os | 11 | 1626 | + | lncRNA gene | gametogenetin binding protein 2, opposite strand | |
Tssr109789 | 11 | 76 | - | TSS region | transcription start site region 109789 | |
Tssr109790 | 11 | 54 | - | TSS region | transcription start site region 109790 | |
Tssr109791 | 11 | 42 | - | TSS region | transcription start site region 109791 | |
Tssr109792 | 11 | 15 | - | TSS region | transcription start site region 109792 | |
Tssr109793 | 11 | 95 | - | TSS region | transcription start site region 109793 | |
Tssr109794 | 11 | 11 | - | TSS region | transcription start site region 109794 | |
Tssr103808 | 11 | 60 | + | TSS region | transcription start site region 103808 | |
Tssr109795 | 11 | 4 | - | TSS region | transcription start site region 109795 | |
Pigw | 11 | 3970 | - | protein coding gene | phosphatidylinositol glycan anchor biosynthesis, class W | |
Cpgi3446 | 11 | 1274 | CpG island | CpG island 3446 | ||
Tssr103809 | 11 | 42 | + | TSS region | transcription start site region 103809 | |
Myo19 | 11 | 30939 | + | protein coding gene | myosin XIX | |
Tssr109796 | 11 | 50 | - | TSS region | transcription start site region 109796 | |
Tssr103810 | 11 | 65 | + | TSS region | transcription start site region 103810 | |
Tssr103811 | 11 | 15 | + | TSS region | transcription start site region 103811 | |
Gm23564 | 11 | 66 | + | miRNA gene | predicted gene, 23564 | |
Tssr103812 | 11 | 17 | + | TSS region | transcription start site region 103812 | |
Znhit3 | 11 | 5406 | - | protein coding gene | zinc finger, HIT type 3 | |
Cpgi3447 | 11 | 500 | CpG island | CpG island 3447 | ||
Tssr109797 | 11 | 26 | - | TSS region | transcription start site region 109797 | |
Tssr109798 | 11 | 33 | - | TSS region | transcription start site region 109798 | |
D11Mit221 | 11 | 106 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 221 | ||
Gm33028 | 11 | 3594 | + | lncRNA gene | predicted gene, 33028 | |
Gm32917 | 11 | 7212 | - | lncRNA gene | predicted gene, 32917 | |
Cpgi3448 | 11 | 193 | CpG island | CpG island 3448 | ||
Tssr109799 | 11 | 11 | - | TSS region | transcription start site region 109799 | |
Tssr103813 | 11 | 7 | + | TSS region | transcription start site region 103813 | |
Cpgi3449 | 11 | 864 | CpG island | CpG island 3449 | ||
Tssr103814 | 11 | 24 | + | TSS region | transcription start site region 103814 | |
Car4 | 11 | 8258 | + | protein coding gene | carbonic anhydrase 4 | |
Tssr103815 | 11 | 11 | + | TSS region | transcription start site region 103815 | |
Tssr103816 | 11 | 18 | + | TSS region | transcription start site region 103816 | |
D11Mit121 | 11 | 119 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 121 | ||
Usp32 | 11 | 155605 | - | protein coding gene | ubiquitin specific peptidase 32 | |
Tssr109800 | 11 | 3 | - | TSS region | transcription start site region 109800 | |
Gm9365 | 11 | 4284 | + | pseudogene | predicted gene 9365 | |
Gm11440 | 11 | 526 | - | pseudogene | predicted gene 11440 | |
Tssr109801 | 11 | 6 | - | TSS region | transcription start site region 109801 | |
Tssr109802 | 11 | 4 | - | TSS region | transcription start site region 109802 | |
Gm11439 | 11 | 408 | - | pseudogene | predicted gene 11439 | |
Tssr103817 | 11 | 12 | + | TSS region | transcription start site region 103817 | |
Gm18157 | 11 | 741 | + | pseudogene | predicted gene, 18157 | |
Rpl13-ps1 | 11 | 667 | - | pseudogene | ribosomal protein L13, pseudogene 1 | |
Cpgi3450 | 11 | 1252 | CpG island | CpG island 3450 | ||
Tssr109803 | 11 | 23 | - | TSS region | transcription start site region 109803 | |
Tssr109804 | 11 | 32 | - | TSS region | transcription start site region 109804 | |
D11Mit159 | 11 | 121 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 159 | ||
Gm23506 | 11 | 106 | + | snRNA gene | predicted gene, 23506 | |
Cpgi3451 | 11 | 278 | CpG island | CpG island 3451 | ||
1700125H20Rik | 11 | 10741 | + | protein coding gene | RIKEN cDNA 1700125H20 gene | |
Tssr3620 | 11 | 5 | + | TSS region | transcription start site region 3620 | |
Tssr103818 | 11 | 12 | + | TSS region | transcription start site region 103818 | |
Tssr103819 | 11 | 7 | + | TSS region | transcription start site region 103819 | |
D11Mit178 | 11 | 145 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 178 | ||
Tssr3621 | 11 | 13 | + | TSS region | transcription start site region 3621 | |
Tssr103820 | 11 | 7 | + | TSS region | transcription start site region 103820 | |
Cpgi3452 | 11 | 466 | CpG island | CpG island 3452 | ||
Appbp2 | 11 | 43812 | - | protein coding gene | amyloid beta precursor protein (cytoplasmic tail) binding protein 2 | |
Tssr103821 | 11 | 19 | + | TSS region | transcription start site region 103821 | |
Tssr103822 | 11 | 13 | + | TSS region | transcription start site region 103822 | |
Gm38935 | 11 | 27310 | + | lncRNA gene | predicted gene, 38935 | |
Akirin1-ps | 11 | 457 | + | pseudogene | akirin 1, pseudogene | |
Cpgi3453 | 11 | 1347 | CpG island | CpG island 3453 | ||
Tssr109805 | 11 | 33 | - | TSS region | transcription start site region 109805 | |
Tssr109806 | 11 | 47 | - | TSS region | transcription start site region 109806 | |
Tssr109807 | 11 | 72 | - | TSS region | transcription start site region 109807 | |
Appbp2os | 11 | 3138 | + | antisense lncRNA gene | amyloid beta precursor protein (cytoplasmic tail) binding protein 2, opposite strand | |
Gm22587 | 11 | 297 | - | unclassified non-coding RNA gene | predicted gene, 22587 | |
Cpgi3454 | 11 | 1645 | CpG island | CpG island 3454 | ||
Tssr109808 | 11 | 31 | - | TSS region | transcription start site region 109808 | |
Tssr103823 | 11 | 20 | + | TSS region | transcription start site region 103823 | |
Tssr103824 | 11 | 54 | + | TSS region | transcription start site region 103824 | |
Ppm1d | 11 | 35817 | + | protein coding gene | protein phosphatase 1D magnesium-dependent, delta isoform | |
Tssr103825 | 11 | 36 | + | TSS region | transcription start site region 103825 | |
Tssr103826 | 11 | 49 | + | TSS region | transcription start site region 103826 | |
Tssr103827 | 11 | 11 | + | TSS region | transcription start site region 103827 | |
Tssr109809 | 11 | 44 | - | TSS region | transcription start site region 109809 | |
Tssr103828 | 11 | 11 | + | TSS region | transcription start site region 103828 | |
Tssr103829 | 11 | 8 | + | TSS region | transcription start site region 103829 | |
Tssr103830 | 11 | 9 | + | TSS region | transcription start site region 103830 | |
Tssr103831 | 11 | 60 | + | TSS region | transcription start site region 103831 | |
Tssr103832 | 11 | 6 | + | TSS region | transcription start site region 103832 | |
Cpgi3455 | 11 | 852 | CpG island | CpG island 3455 | ||
Tssr109810 | 11 | 15 | - | TSS region | transcription start site region 109810 | |
Tssr103833 | 11 | 22 | + | TSS region | transcription start site region 103833 | |
Tssr103834 | 11 | 63 | + | TSS region | transcription start site region 103834 | |
Bcas3 | 11 | 472891 | + | protein coding gene | breast carcinoma amplified sequence 3 | |
Tssr103835 | 11 | 12 | + | TSS region | transcription start site region 103835 | |
Tssr103836 | 11 | 14 | + | TSS region | transcription start site region 103836 | |
Gm23765 | 11 | 146 | + | snRNA gene | predicted gene, 23765 | |
Tssr109811 | 11 | 7 | - | TSS region | transcription start site region 109811 | |
Tssr109812 | 11 | 1 | - | TSS region | transcription start site region 109812 | |
Tssr103837 | 11 | 3 | + | TSS region | transcription start site region 103837 | |
D11Mit324 | 11 | 101 | DNA segment | DNA Segment, Chr 11, Massachusetts Institute of Technology 324 | ||
D11Mit220 | 11 | 112 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 220 | ||
D11Mit324.2 | 11 | 172 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 324.2 | ||
7030407E18Rik | 11 | 3737 | unclassified gene | RIKEN cDNA 7030407E18 gene | ||
Tssr103838 | 11 | 4 | + | TSS region | transcription start site region 103838 | |
Tssr103839 | 11 | 15 | + | TSS region | transcription start site region 103839 | |
Tssr103840 | 11 | 3 | + | TSS region | transcription start site region 103840 | |
Bcas3os1 | 11 | 17544 | - | antisense lncRNA gene | breast carcinoma amplified sequence 3, opposite strand 1 | |
Tssr103841 | 11 | 40 | + | TSS region | transcription start site region 103841 | |
Tssr109813 | 11 | 13 | - | TSS region | transcription start site region 109813 | |
Tssr103842 | 11 | 11 | + | TSS region | transcription start site region 103842 | |
Tssr103843 | 11 | 11 | + | TSS region | transcription start site region 103843 | |
Tssr103844 | 11 | 16 | + | TSS region | transcription start site region 103844 | |
Tssr103845 | 11 | 17 | + | TSS region | transcription start site region 103845 | |
Mir5110 | 11 | 86 | - | miRNA gene | microRNA 5110 | |
Bcas3os2 | 11 | 8847 | - | antisense lncRNA gene | breast carcinoma amplified sequence 3 opposite strand 2 | |
Tssr109814 | 11 | 11 | - | TSS region | transcription start site region 109814 | |
Tssr109815 | 11 | 33 | - | TSS region | transcription start site region 109815 | |
Gm23473 | 11 | 115 | + | rRNA gene | predicted gene, 23473 | |
2610027K06Rik | 11 | 40562 | - | lncRNA gene | RIKEN cDNA 2610027K06 gene | |
Tssr109816 | 11 | 21 | - | TSS region | transcription start site region 109816 | |
Tssr103846 | 11 | 9 | + | TSS region | transcription start site region 103846 | |
Tssr103847 | 11 | 8 | + | TSS region | transcription start site region 103847 | |
Tssr103848 | 11 | 15 | + | TSS region | transcription start site region 103848 | |
Tssr103849 | 11 | 40 | + | TSS region | transcription start site region 103849 | |
Tssr103850 | 11 | 7 | + | TSS region | transcription start site region 103850 | |
Tssr103851 | 11 | 7 | + | TSS region | transcription start site region 103851 | |
Cpgi3456 | 11 | 1233 | CpG island | CpG island 3456 | ||
Tssr103852 | 11 | 12 | + | TSS region | transcription start site region 103852 | |
Cpgi3457 | 11 | 359 | CpG island | CpG island 3457 | ||
Tssr103853 | 11 | 40 | + | TSS region | transcription start site region 103853 | |
Tssr103854 | 11 | 19 | + | TSS region | transcription start site region 103854 | |
Tssr103855 | 11 | 14 | + | TSS region | transcription start site region 103855 | |
Cpgi3458 | 11 | 1792 | CpG island | CpG island 3458 | ||
Tssr109817 | 11 | 16 | - | TSS region | transcription start site region 109817 | |
Tbx2 | 11 | 9333 | + | protein coding gene | T-box 2 | |
Tssr103856 | 11 | 15 | + | TSS region | transcription start site region 103856 | |
Tssr103857 | 11 | 26 | + | TSS region | transcription start site region 103857 | |
Tssr103858 | 11 | 11 | + | TSS region | transcription start site region 103858 | |
Tssr103859 | 11 | 24 | + | TSS region | transcription start site region 103859 | |
Tssr103860 | 11 | 19 | + | TSS region | transcription start site region 103860 | |
Cpgi3459 | 11 | 235 | CpG island | CpG island 3459 | ||
Cpgi3460 | 11 | 1793 | CpG island | CpG island 3460 | ||
Cpgi3461 | 11 | 824 | CpG island | CpG island 3461 | ||
Cpgi3462 | 11 | 575 | CpG island | CpG island 3462 | ||
Cpgi3463 | 11 | 1879 | CpG island | CpG island 3463 | ||
Gm11444 | 11 | 3543 | - | protein coding gene | predicted gene 11444 | |
Cpgi3464 | 11 | 315 | CpG island | CpG island 3464 | ||
Tssr103861 | 11 | 13 | + | TSS region | transcription start site region 103861 | |
Cpgi3465 | 11 | 455 | CpG island | CpG island 3465 | ||
Tssr103862 | 11 | 58 | + | TSS region | transcription start site region 103862 | |
Tbx4 | 11 | 29675 | + | protein coding gene | T-box 4 | |
Cpgi3466 | 11 | 459 | CpG island | CpG island 3466 | ||
Tssr103863 | 11 | 15 | + | TSS region | transcription start site region 103863 | |
Cpgi3467 | 11 | 1234 | CpG island | CpG island 3467 | ||
Tssr103864 | 11 | 25 | + | TSS region | transcription start site region 103864 | |
Cpgi3468 | 11 | 682 | CpG island | CpG island 3468 |