Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:84514379-84530534

13 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr109764	11	84519047 to 84519059	12	-	TSS region	transcription start site region 109764
Tssr109765	11	84519273 to 84519286	13	-	TSS region	transcription start site region 109765
Lhx1	11	84519379 to 84525534	6155	-	protein coding gene	LIM homeobox protein 1
Cpgi3432	11	84519515 to 84520544	1029		CpG island	CpG island 3432
Cpgi3433	11	84522046 to 84522289	243		CpG island	CpG island 3433
Cpgi3434	11	84522615 to 84523041	426		CpG island	CpG island 3434
Cpgi3435	11	84523984 to 84526601	2617		CpG island	CpG island 3435
Tssr109766	11	84524855 to 84524870	15	-	TSS region	transcription start site region 109766
Tssr109767	11	84525514 to 84525542	28	-	TSS region	transcription start site region 109767
Tssr103805	11	84525647 to 84525658	11	+	TSS region	transcription start site region 103805
Lhx1os	11	84525660 to 84535831	10171	+	lincRNA gene	LIM homeobox 1, opposite strand
Tssr103806	11	84525672 to 84525689	17	+	TSS region	transcription start site region 103806
Cpgi3436	11	84529236 to 84529563	327		CpG island	CpG island 3436