Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:84014677-84516651

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Synrg 11 83964428 to 84044578 80150 + protein coding gene synergin, gamma
Tssr103786 11 84033032 to 84033038 6 + TSS region transcription start site region 103786
Dusp14 11 84048041 to 84069256 21215 - protein coding gene dual specificity phosphatase 14
Tssr109739 11 84067063 to 84067095 32 - TSS region transcription start site region 109739
Tssr109740 11 84067757 to 84067770 13 - TSS region transcription start site region 109740
Tssr109741 11 84067776 to 84067786 10 - TSS region transcription start site region 109741
Cpgi3428 11 84067864 to 84068862 998 CpG island CpG island 3428
Tssr109742 11 84068325 to 84068345 20 - TSS region transcription start site region 109742
Tssr109743 11 84068359 to 84068367 8 - TSS region transcription start site region 109743
Tssr109744 11 84068375 to 84068386 11 - TSS region transcription start site region 109744
Tssr109745 11 84068554 to 84068604 50 - TSS region transcription start site region 109745
Tssr109746 11 84068766 to 84068777 11 - TSS region transcription start site region 109746
Tssr3618 11 84068786 to 84068797 11 - TSS region transcription start site region 3618
Tssr109747 11 84069124 to 84069135 11 - TSS region transcription start site region 109747
Tssr109748 11 84069179 to 84069205 26 - TSS region transcription start site region 109748
Tada2a 11 84078920 to 84129600 50680 - protein coding gene transcriptional adaptor 2A
Tssr109749 11 84083620 to 84083624 4 - TSS region transcription start site region 109749
Tssr103787 11 84092783 to 84092787 4 + TSS region transcription start site region 103787
Tssr109750 11 84101978 to 84101982 4 - TSS region transcription start site region 109750
Cpgi3429 11 84129060 to 84130096 1036 CpG island CpG island 3429
Tssr109751 11 84129558 to 84129580 22 - TSS region transcription start site region 109751
Tssr109752 11 84129582 to 84129620 38 - TSS region transcription start site region 109752
Tssr109753 11 84129623 to 84129634 11 - TSS region transcription start site region 109753
Tssr103788 11 84129649 to 84129705 56 + TSS region transcription start site region 103788
Acaca 11 84129677 to 84401651 271974 + protein coding gene acetyl-Coenzyme A carboxylase alpha
Tssr103789 11 84129725 to 84129732 7 + TSS region transcription start site region 103789
Tssr103790 11 84129737 to 84129755 18 + TSS region transcription start site region 103790
Tssr103791 11 84129757 to 84129784 27 + TSS region transcription start site region 103791
Gm11437 11 84148361 to 84167476 19115 - protein coding gene predicted gene 11437
Tssr3619 11 84160921 to 84160923 2 + TSS region transcription start site region 3619
Tssr109754 11 84164476 to 84164493 17 - TSS region transcription start site region 109754
Tssr109755 11 84167466 to 84167508 42 - TSS region transcription start site region 109755
Tssr103792 11 84173291 to 84173304 13 + TSS region transcription start site region 103792
Tssr103793 11 84173348 to 84173363 15 + TSS region transcription start site region 103793
Tssr103794 11 84173450 to 84173460 10 + TSS region transcription start site region 103794
Tssr103795 11 84173472 to 84173494 22 + TSS region transcription start site region 103795
Tssr103796 11 84173496 to 84173525 29 + TSS region transcription start site region 103796
Tssr103797 11 84177630 to 84177653 23 + TSS region transcription start site region 103797
Cpgi3430 11 84179174 to 84180508 1334 CpG island CpG island 3430
Tssr103798 11 84179611 to 84179657 46 + TSS region transcription start site region 103798
Tssr103799 11 84179658 to 84179687 29 + TSS region transcription start site region 103799
Tssr103800 11 84179792 to 84179849 57 + TSS region transcription start site region 103800
Tssr103801 11 84179852 to 84179863 11 + TSS region transcription start site region 103801
Tssr103802 11 84179866 to 84179877 11 + TSS region transcription start site region 103802
Tssr103803 11 84180309 to 84180360 51 + TSS region transcription start site region 103803
Gm37391 11 84189593 to 84191910 2317 + unclassified gene predicted gene, 37391
Gm31074 11 84204039 to 84208269 4230 - pseudogene predicted gene, 31074
D11Dcr35 11 84233331 to 84233426 95 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 35
Tssr103804 11 84249398 to 84249412 14 + TSS region transcription start site region 103804
Aatf 11 84422855 to 84513522 90667 - protein coding gene apoptosis antagonizing transcription factor
Tssr109756 11 84442644 to 84442668 24 - TSS region transcription start site region 109756
Tssr109757 11 84442680 to 84442703 23 - TSS region transcription start site region 109757
Tssr109758 11 84443061 to 84443071 10 - TSS region transcription start site region 109758
Tssr109759 11 84491520 to 84491526 6 - TSS region transcription start site region 109759
Tssr109760 11 84491529 to 84491534 5 - TSS region transcription start site region 109760
Tssr109761 11 84491567 to 84491578 11 - TSS region transcription start site region 109761
Cpgi3431 11 84513086 to 84514030 944 CpG island CpG island 3431
Tssr109762 11 84513391 to 84513402 11 - TSS region transcription start site region 109762
Tssr109763 11 84513485 to 84513553 68 - TSS region transcription start site region 109763