Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:83423079-83523123

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gas2l2 11 83421902 to 83429455 7553 - protein coding gene growth arrest-specific 2 like 2
Cpgi3413 11 83427033 to 83427607 574 CpG island CpG island 3413
Tssr109658 11 83429807 to 83429832 25 - TSS region transcription start site region 109658
Tssr103697 11 83437646 to 83437651 5 + TSS region transcription start site region 103697
Tssr103698 11 83437655 to 83437671 16 + TSS region transcription start site region 103698
Tssr103699 11 83437678 to 83437708 30 + TSS region transcription start site region 103699
1700020L24Rik 11 83437694 to 83441238 3544 + protein coding gene RIKEN cDNA 1700020L24 gene
Tssr103700 11 83437709 to 83437718 9 + TSS region transcription start site region 103700
Tssr3609 11 83437726 to 83437727 1 + TSS region transcription start site region 3609
Tssr103701 11 83439953 to 83439967 14 + TSS region transcription start site region 103701
Cpgi3414 11 83440085 to 83441156 1071 CpG island CpG island 3414
Tssr103702 11 83440397 to 83440400 3 + TSS region transcription start site region 103702
Mmp28 11 83440768 to 83463040 22272 - protein coding gene matrix metallopeptidase 28 (epilysin)
Cpgi3415 11 83442537 to 83442998 461 CpG island CpG island 3415
Cpgi3416 11 83444655 to 83445321 666 CpG island CpG island 3416
Cpgi3417 11 83462413 to 83463289 876 CpG island CpG island 3417
Tssr109659 11 83462981 to 83463038 57 - TSS region transcription start site region 109659
Cpgi3418 11 83472610 to 83473808 1198 CpG island CpG island 3418
Tssr103703 11 83473079 to 83473123 44 + TSS region transcription start site region 103703
Taf15 11 83473086 to 83506743 33657 + protein coding gene TATA-box binding protein associated factor 15
Tssr103704 11 83473140 to 83473157 17 + TSS region transcription start site region 103704
Tssr103705 11 83490608 to 83490612 4 + TSS region transcription start site region 103705
Tssr103706 11 83500108 to 83500117 9 + TSS region transcription start site region 103706
Gm32650 11 83511305 to 83546540 35235 + lncRNA gene predicted gene, 32650
Heatr9 11 83511736 to 83522175 10439 - protein coding gene HEAT repeat containing 9
Gm23247 11 83521156 to 83521262 106 + snRNA gene predicted gene, 23247
Tssr109660 11 83522102 to 83522109 7 - TSS region transcription start site region 109660
Tssr109661 11 83522126 to 83522140 14 - TSS region transcription start site region 109661