Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:83306902-83544455

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ap2b1 11 83299024 to 83405035 106011 + protein coding gene adaptor-related protein complex 2, beta 1 subunit
Tssr103689 11 83321647 to 83321650 3 + TSS region transcription start site region 103689
D11Pas16 11 83322842 to 83322950 108 DNA segment DNA segment, Chr 11, Pasteur Institute 16
D11Pas17 11 83346895 to 83347055 160 DNA segment DNA segment, Chr 11, Pasteur Institute 17
Tssr103690 11 83355255 to 83355259 4 + TSS region transcription start site region 103690
Gm23951 11 83366870 to 83367001 131 - snoRNA gene predicted gene, 23951
Tssr109657 11 83393233 to 83393248 15 - TSS region transcription start site region 109657
D11Bhm143 11 83400688 to 83400785 97 DNA segment DNA segment, Chr 11, Boehm 143
Tssr103691 11 83404988 to 83404995 7 + TSS region transcription start site region 103691
Cpgi3411 11 83409123 to 83410358 1235 CpG island CpG island 3411
Rasl10b 11 83409142 to 83421039 11897 + protein coding gene RAS-like, family 10, member B
Tssr103692 11 83409216 to 83409289 73 + TSS region transcription start site region 103692
Tssr103693 11 83409655 to 83409718 63 + TSS region transcription start site region 103693
Tssr103694 11 83409720 to 83409727 7 + TSS region transcription start site region 103694
Tssr103695 11 83409736 to 83409749 13 + TSS region transcription start site region 103695
D11Bhm144 11 83411670 to 83411732 62 DNA segment DNA segment, Chr 11, Boehm 144
Cpgi3412 11 83418370 to 83419490 1120 CpG island CpG island 3412
Tssr103696 11 83418961 to 83418977 16 + TSS region transcription start site region 103696
Gas2l2 11 83421902 to 83429455 7553 - protein coding gene growth arrest-specific 2 like 2
Cpgi3413 11 83427033 to 83427607 574 CpG island CpG island 3413
Tssr109658 11 83429807 to 83429832 25 - TSS region transcription start site region 109658
Tssr103697 11 83437646 to 83437651 5 + TSS region transcription start site region 103697
Tssr103698 11 83437655 to 83437671 16 + TSS region transcription start site region 103698
Tssr103699 11 83437678 to 83437708 30 + TSS region transcription start site region 103699
1700020L24Rik 11 83437694 to 83441238 3544 + protein coding gene RIKEN cDNA 1700020L24 gene
Tssr103700 11 83437709 to 83437718 9 + TSS region transcription start site region 103700
Tssr3609 11 83437726 to 83437727 1 + TSS region transcription start site region 3609
Tssr103701 11 83439953 to 83439967 14 + TSS region transcription start site region 103701
Cpgi3414 11 83440085 to 83441156 1071 CpG island CpG island 3414
Tssr103702 11 83440397 to 83440400 3 + TSS region transcription start site region 103702
Mmp28 11 83440768 to 83463040 22272 - protein coding gene matrix metallopeptidase 28 (epilysin)
Cpgi3415 11 83442537 to 83442998 461 CpG island CpG island 3415
Cpgi3416 11 83444655 to 83445321 666 CpG island CpG island 3416
Cpgi3417 11 83462413 to 83463289 876 CpG island CpG island 3417
Tssr109659 11 83462981 to 83463038 57 - TSS region transcription start site region 109659
Cpgi3418 11 83472610 to 83473808 1198 CpG island CpG island 3418
Tssr103703 11 83473079 to 83473123 44 + TSS region transcription start site region 103703
Taf15 11 83473086 to 83506743 33657 + protein coding gene TATA-box binding protein associated factor 15
Tssr103704 11 83473140 to 83473157 17 + TSS region transcription start site region 103704
Tssr103705 11 83490608 to 83490612 4 + TSS region transcription start site region 103705
Tssr103706 11 83500108 to 83500117 9 + TSS region transcription start site region 103706
Gm32650 11 83511305 to 83546540 35235 + lncRNA gene predicted gene, 32650
Heatr9 11 83511736 to 83522175 10439 - protein coding gene HEAT repeat containing 9
Gm23247 11 83521156 to 83521262 106 + snRNA gene predicted gene, 23247
Tssr109660 11 83522102 to 83522109 7 - TSS region transcription start site region 109660
Tssr109661 11 83522126 to 83522140 14 - TSS region transcription start site region 109661
Tssr109662 11 83524729 to 83524734 5 - TSS region transcription start site region 109662
Tssr103707 11 83525777 to 83525788 11 + TSS region transcription start site region 103707
Ccl5 11 83525778 to 83530518 4740 - protein coding gene chemokine (C-C motif) ligand 5
Tssr103708 11 83525804 to 83525823 19 + TSS region transcription start site region 103708
Tssr109663 11 83525821 to 83525829 8 - TSS region transcription start site region 109663
Tssr109664 11 83525846 to 83525875 29 - TSS region transcription start site region 109664
Tssr109665 11 83525879 to 83525908 29 - TSS region transcription start site region 109665
Tssr109666 11 83525918 to 83525993 75 - TSS region transcription start site region 109666
Tssr103709 11 83525955 to 83525980 25 + TSS region transcription start site region 103709
Tssr103710 11 83525984 to 83525999 15 + TSS region transcription start site region 103710
Tssr109667 11 83525994 to 83526021 27 - TSS region transcription start site region 109667
Tssr103711 11 83526003 to 83526027 24 + TSS region transcription start site region 103711
Tssr109668 11 83526025 to 83526070 45 - TSS region transcription start site region 109668
Tssr109669 11 83526503 to 83526515 12 - TSS region transcription start site region 109669
Tssr109670 11 83527662 to 83527674 12 - TSS region transcription start site region 109670
Tssr109671 11 83529099 to 83529117 18 - TSS region transcription start site region 109671
Tssr109672 11 83529183 to 83529203 20 - TSS region transcription start site region 109672
Tssr109673 11 83529221 to 83529247 26 - TSS region transcription start site region 109673
Tssr109674 11 83530480 to 83530500 20 - TSS region transcription start site region 109674
Tssr109675 11 83530505 to 83530533 28 - TSS region transcription start site region 109675
Tssr109676 11 83530650 to 83530664 14 - TSS region transcription start site region 109676
Tssr103712 11 83532468 to 83532471 3 + TSS region transcription start site region 103712
Tssr103713 11 83535083 to 83535109 26 + TSS region transcription start site region 103713