Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:83241743-83331752

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm38924 11 83244748 to 83254270 9522 - lncRNA gene predicted gene, 38924
Gm11427 11 83254267 to 83260542 6275 + pseudogene predicted gene 11427
Gm23444 11 83271498 to 83271688 190 + snRNA gene predicted gene, 23444
Slfn14 11 83275110 to 83286726 11616 - protein coding gene schlafen 14
Tssr109649 11 83286664 to 83286679 15 - TSS region transcription start site region 109649
Tssr109650 11 83286680 to 83286699 19 - TSS region transcription start site region 109650
Tssr109651 11 83286722 to 83286729 7 - TSS region transcription start site region 109651
Tssr109652 11 83286743 to 83286752 9 - TSS region transcription start site region 109652
Cpgi3408 11 83291525 to 83291931 406 CpG island CpG island 3408
Tssr103677 11 83291671 to 83291682 11 + TSS region transcription start site region 103677
Tssr103678 11 83291683 to 83291709 26 + TSS region transcription start site region 103678
AA465934 11 83291699 to 83294632 2933 + lncRNA gene expressed sequence AA465934
Tssr103679 11 83291719 to 83291748 29 + TSS region transcription start site region 103679
Tssr103680 11 83291966 to 83291967 1 + TSS region transcription start site region 103680
AI450353 11 83293430 to 83294929 1499 + lncRNA gene expressed sequence AI450353
Tssr103681 11 83293454 to 83293458 4 + TSS region transcription start site region 103681
Snord7 11 83294304 to 83294399 95 + snoRNA gene small nucleolar RNA, C/D box 7
Pex12 11 83294645 to 83298977 4332 - protein coding gene peroxisomal biogenesis factor 12
Cpgi3409 11 83298608 to 83299233 625 CpG island CpG island 3409
Tssr109653 11 83298845 to 83298870 25 - TSS region transcription start site region 109653
Tssr109654 11 83298873 to 83298905 32 - TSS region transcription start site region 109654
Tssr109655 11 83298910 to 83298983 73 - TSS region transcription start site region 109655
Tssr103682 11 83298910 to 83298925 15 + TSS region transcription start site region 103682
Tssr103683 11 83298933 to 83298958 25 + TSS region transcription start site region 103683
Tssr103684 11 83299005 to 83299046 41 + TSS region transcription start site region 103684
Ap2b1 11 83299024 to 83405035 106011 + protein coding gene adaptor-related protein complex 2, beta 1 subunit
Tssr103685 11 83299063 to 83299091 28 + TSS region transcription start site region 103685
Cpgi3410 11 83302525 to 83303283 758 CpG island CpG island 3410
Tssr109656 11 83302614 to 83302637 23 - TSS region transcription start site region 109656
Tssr103686 11 83302641 to 83302803 162 + TSS region transcription start site region 103686
Tssr103687 11 83302817 to 83302822 5 + TSS region transcription start site region 103687
Tssr103688 11 83305534 to 83305541 7 + TSS region transcription start site region 103688
Tssr103689 11 83321647 to 83321650 3 + TSS region transcription start site region 103689
D11Pas16 11 83322842 to 83322950 108 DNA segment DNA segment, Chr 11, Pasteur Institute 16